Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G80420 Arabidopsis thaliana HOM05D007289 ORTHO05D009215 1.4e-198 696.0 354 100.0
AL2G41080 Arabidopsis lyrata HOM05D007289 ORTHO05D009215 4.4e-171 604.7 361 87.3
Carub.0002s2715 Capsella rubella HOM05D007289 ORTHO05D009215 3.3e-158 562.0 367 82.0
Thhalv10018735m.g Eutrema salsugineum HOM05D007289 ORTHO05D009215 7.3e-158 560.8 372 80.6
Sp5g35390 Schrenkiella parvula HOM05D007289 ORTHO05D009215 7.5e-155 550.8 366 81.4
CARHR074820 Cardamine hirsuta HOM05D007289 ORTHO05D009215 2.9e-154 548.9 365 81.9
BcaC03g15968 Brassica carinata HOM05D007289 ORTHO05D009215 7.8e-144 514.2 358 77.7
BolC2t09743H Brassica oleracea HOM05D007289 ORTHO05D009215 2.3e-143 512.7 358 77.4
Aa31LG4G690 Aethionema arabicum HOM05D007289 ORTHO05D009215 5.1e-143 511.5 375 74.4
C02p37330 Brassica napus HOM05D007289 ORTHO05D009215 1.5e-142 510.0 358 77.4
A02p23560 Brassica napus HOM05D007289 ORTHO05D009215 2.5e-142 509.2 359 76.0
BraA02t07349Z Brassica rapa HOM05D007289 ORTHO05D009215 2.5e-142 509.2 359 76.0
THA.LOC104808206 Tarenaya hassleriana HOM05D007289 ORTHO05D009215 8.1e-125 451.1 368 66.0
BcaB05g25270 Brassica carinata HOM05D002927 ORTHO05D003841 3.5e-120 435.6 364 68.1
Prupe.3G073900 Prunus persica HOM05D007289 ORTHO05D009215 1.5e-102 377.1 366 57.9
CSS0039074 Camellia sinensis var. sinensis HOM05D007289 ORTHO05D009215 3.7e-101 372.5 378 55.3
Ciclev10025766m.g Citrus clementina HOM05D007289 ORTHO05D009215 1.0e-98 364.4 373 56.8
MD17G1197800 Malus domestica HOM05D007289 ORTHO05D009215 2.1e-96 356.7 375 56.0
Dinv30529 Davidia involucrata HOM05D007289 ORTHO05D009215 1.1e-94 350.9 386 52.3
Gohir.A02G122500 Gossypium hirsutum HOM05D007289 ORTHO05D009215 1.9e-94 350.1 368 56.0
FAN02G0535 Fragaria x ananassa HOM05D007289 ORTHO05D009215 9.7e-94 347.8 366 56.0
TAR383G0594 Trochodendron aralioides HOM05D007289 ORTHO05D009215 9.7e-94 347.8 385 54.5
Gorai.002G058300 Gossypium raimondii HOM05D007289 ORTHO05D009215 1.3e-93 347.4 370 55.7
FvH4_6g30910 Fragaria vesca HOM05D007289 ORTHO05D009215 1.7e-93 347.1 362 57.5
TWI75G1369 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 2.2e-93 346.7 355 54.9
Thecc.06G082700 Theobroma cacao HOM05D007289 ORTHO05D009215 6.3e-93 345.1 374 54.5
RcHm_v2.0_Chr2g0137421 Rosa chinensis HOM05D007289 ORTHO05D009215 5.3e-92 342.0 371 54.4
CANSAT56G1700 Cannabis sativa HOM05D007289 ORTHO05D009215 4.5e-91 339.0 379 52.0
vmacro18934 Vaccinium macrocarpon HOM05D007289 ORTHO05D009215 5.9e-91 338.6 381 51.7
Nitab4.5_0002327g0060 Nicotiana tabacum HOM05D007289 ORTHO05D009215 1.0e-90 337.8 363 52.1
CiPaw.02G152300 Carya illinoinensis HOM05D007289 ORTHO05D009215 2.2e-90 336.7 337 53.7
Atru.chr1.3224 Acer truncatum HOM05D007289 ORTHO05D009215 2.9e-90 336.3 384 51.3
COL.COLO4_30328 Corchorus olitorius HOM05D007289 ORTHO05D009215 2.9e-90 336.3 368 53.3
Aqoxy7G01850 Aquilegia oxysepala HOM05D007289 ORTHO05D009215 1.1e-89 334.3 377 50.7
PGSC0003DMG400016511 Solanum tuberosum HOM05D007289 ORTHO05D009215 1.4e-89 334.0 370 51.9
TPR.G37243 Trifolium pratense HOM05D007289 ORTHO05D009215 4.2e-89 332.4 371 50.7
Manes.04G121300 Manihot esculenta HOM05D007289 ORTHO05D009215 7.2e-89 331.6 372 50.5
Sopen06g025060 Solanum pennellii HOM05D007289 ORTHO05D009215 7.2e-89 331.6 370 51.6
MELO3C023367.2 Cucumis melo HOM05D007289 ORTHO05D009215 2.1e-88 330.1 365 53.4
Glyma.13G360800 Glycine max HOM05D007289 ORTHO05D009215 2.7e-88 329.7 369 49.9
PGR102G0666 Punica granatum HOM05D007289 ORTHO05D009215 2.7e-88 329.7 364 53.6
Solyc06g066780.3 Solanum lycopersicum HOM05D007289 ORTHO05D009215 2.7e-88 329.7 370 51.4
Ca_01106_v3 Cicer arietinum L. HOM05D007289 ORTHO05D009215 7.9e-88 328.2 372 51.3
Lalb_Chr14g0373531 Lupinus albus HOM05D007289 ORTHO05D009215 1.0e-87 327.8 365 51.8
Cfa002049 Carpinus fangiana HOM05D007289 ORTHO05D009215 1.4e-87 327.4 361 54.0
Lalb_Chr22g0351171 Lupinus albus HOM05D007289 ORTHO05D009215 1.4e-87 327.4 371 51.5
Potri.001G178100 Populus trichocarpa HOM05D007289 ORTHO05D009215 1.4e-87 327.4 366 51.1
QL05p025382 Quercus lobata HOM05D007289 ORTHO05D009215 1.8e-87 327.0 377 51.7
CsaV3_7G033000 Cucumis sativus L. HOM05D007289 ORTHO05D009215 3.9e-87 325.9 373 52.3
PSO782G0119 Papaver somniferum HOM05D007289 ORTHO05D009215 5.1e-87 325.5 365 50.7
Psat5g299280 Pisum sativum HOM05D007289 ORTHO05D009215 5.1e-87 325.5 372 50.5
Hund06601 Selenicereus undatus HOM05D007289 ORTHO05D009215 5.1e-87 325.5 385 49.1
arahy.Tifrunner.gnm1.ann1.UJ7D22 Arachis hypogaea HOM05D007289 ORTHO05D009215 6.7e-87 325.1 366 50.5
arahy.Tifrunner.gnm1.ann1.HRS6MU Arachis hypogaea HOM05D007289 ORTHO05D009215 8.8e-87 324.7 366 50.5
Cc04_g03590 Coffea canephora HOM05D007289 ORTHO05D009215 1.1e-86 324.3 369 50.7
VMungo1080G1522 Vigna mungo HOM05D007289 ORTHO05D009215 2.0e-86 323.6 371 49.3
Medtr2g102430 Medicago truncatula HOM05D007289 ORTHO05D009215 2.6e-86 323.2 369 51.2
Lj9C506T12 Lonicera japonica HOM05D007289 ORTHO05D009215 4.4e-86 322.4 386 49.7
Phvul.005G172600 Phaseolus vulgaris HOM05D007289 ORTHO05D009215 5.7e-86 322.0 366 49.7
Lsat_1_v5_gn_4_103480 Lactuca sativa HOM05D007289 ORTHO05D009215 7.4e-86 321.6 371 50.7
Lj3g0010801 Lotus japonicus HOM05D007289 ORTHO05D009215 7.4e-86 321.6 373 49.1
Sed0021795 Sechium edule HOM05D007289 ORTHO05D009215 7.4e-86 321.6 371 51.5
GSVIVG01017153001 Vitis vinifera HOM05D007289 ORTHO05D009215 1.7e-85 320.5 333 55.3
CAN.G395.19 Capsicum annuum HOM05D007289 ORTHO05D009215 2.2e-85 320.1 363 51.0
Rhsim08G0218600 Rhododendron simsii HOM05D007289 ORTHO05D009215 1.1e-84 317.8 396 47.7
Sabra01G0148500 Salix brachista HOM05D007289 ORTHO05D009215 1.8e-84 317.0 366 49.7
DCAR_016227 Daucus carota HOM05D007289 ORTHO05D009215 2.6e-83 313.2 367 49.9
Sc12g0009160 Simmondsia chinensis HOM05D007289 ORTHO05D009215 3.4e-83 312.8 382 49.7
MBI04_g26647_MAGBIO Magnolia biondii HOM05D007289 ORTHO05D009215 5.9e-83 312.0 366 49.7
Os06g0144000 Oryza sativa ssp. japonica HOM05D007289 ORTHO05D009215 5.9e-83 312.0 364 48.6
Peaxi162Scf00207g00834 Petunia axillaris HOM05D007289 ORTHO05D009215 7.7e-83 311.6 304 54.6
MSTRG.11091 Avicennia marina HOM05D007289 ORTHO05D009215 1.0e-82 311.2 369 47.7
FAN09G0173 Fragaria x ananassa HOM05D007289 ORTHO05D009215 2.9e-82 309.7 306 58.5
ECA232G0523 Erigeron canadensis HOM05D007289 ORTHO05D009215 1.1e-81 307.8 355 51.3
HanXRQChr16g0501051 Helianthus annuus HOM05D007289 ORTHO05D009215 1.6e-80 303.9 356 48.3
AUR62016430 Chenopodium quinoa HOM05D007289 ORTHO05D009215 1.8e-79 300.4 390 46.4
AUR62011614 Chenopodium quinoa HOM05D007289 ORTHO05D009215 3.0e-79 299.7 385 46.8
Oeu033497.1 Olea europaea HOM05D007289 ORTHO05D009215 5.2e-79 298.9 370 50.3
Migut.I00845 Erythranthe guttata HOM05D007289 ORTHO05D009215 6.7e-79 298.5 367 47.1
Duzib235G0864 Durio zibethinus HOM05D007289 ORTHO05D009215 8.2e-77 291.6 372 50.5
ATR0037G063 Amborella trichopoda HOM05D007289 ORTHO05D009215 6.7e-71 271.9 395 43.8
EL10Ac9g21988 Beta vulgaris HOM05D007289 ORTHO05D009215 9.7e-70 268.1 445 40.4
Actinidia15825 Actinidia chinensis HOM05D002927 ORTHO05D003841 4.8e-69 265.8 339 50.1
Nn8g39279 Nelumbo nucifera HOM05D007289 ORTHO05D009215 9.1e-68 261.5 336 47.0
CDE02G4373 Ceratophyllum demersum HOM05D004733 ORTHO05D005925 1.3e-66 257.7 391 41.7
PSO339G0085 Papaver somniferum HOM05D007289 ORTHO05D009215 1.3e-66 257.7 273 50.9
Cpa.g.sc10.164 Carica papaya HOM05D007289 ORTHO05D009215 1.4e-63 247.7 288 50.3
SalBow2G1977 Salvia bowleyana HOM05D007289 ORTHO05D009215 1.2e-62 244.6 378 41.8
SEGI_14605 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 6.3e-61 238.8 274 46.7
HPP92_000676 Vanilla planifolia HOM05D007289 ORTHO05D009215 4.1e-60 236.1 270 45.9
Haze_16457 Corylus avellana HOM05D007289 ORTHO05D009215 1.2e-54 218.0 535 32.7
Glyma.15G013100 Glycine max HOM05D007289 ORTHO05D009215 7.0e-52 208.8 234 48.3
Pp3c15_20480 Physcomitrium patens HOM05D007289 ORTHO05D009215 4.3e-49 199.5 285 38.6
Mapoly0044s0047 Marchantia polymorpha HOM05D007289 ORTHO05D009215 2.8e-48 196.8 342 36.3
Gohir.D03G073900 Gossypium hirsutum HOM05D007289 ORTHO05D009215 4.7e-48 196.1 192 59.4
ClCG09G002310 Citrullus lanatus HOM05D007289 ORTHO05D009215 1.4e-44 184.5 165 60.0
FAN05G4871 Fragaria x ananassa HOM05D007289 ORTHO05D009215 5.0e-42 176.0 157 62.4
FAN05G4017 Fragaria x ananassa HOM05D007289 ORTHO05D009215 3.6e-40 169.9 194 53.1
TWI12G0812 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 1.4e-39 167.9 198 48.5
Eucgr.F03006 Eucalyptus grandis HOM05D007289 ORTHO05D009215 3.4e-38 163.3 224 43.8
Nitab4.5_0021849g0010 Nicotiana tabacum HOM05D007289 ORTHO05D009215 1.6e-35 154.5 202 46.0
SEGI_13111 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 4.6e-35 152.9 183 48.1
unitig_21.g20513 Utricularia gibba HOM05D007289 ORTHO05D009215 6.6e-34 149.1 374 33.7
Zm00001eb377280 Zea mays HOM05D007289 ORTHO05D009215 2.0e-30 137.5 199 45.2
CBR_g23739 Chara braunii HOM05D007289 ORTHO05D009215 1.1e-28 131.7 97 55.7
Hma1.2p1_0845F.1_g227540 Hydrangea macrophylla HOM05D007289 ORTHO05D009215 3.6e-24 116.7 106 58.5
ClCG09G002320 Citrullus lanatus HOM05D007289 ORTHO05D009215 6.2e-24 115.9 246 37.4
Lj2P1136T43 Lonicera japonica HOM05D007289 ORTHO05D009215 6.4e-21 105.9 112 50.9
Ah.01g011120 Amaranthus hybridus HOM05D007289 ORTHO05D009215 2.3e-18 97.4 146 42.5
Pp3c21_18730 Physcomitrium patens HOM05D007289 ORTHO05D009215 1.8e-07 61.2 154 29.2


User provided reference genes

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