Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G41970 Arabidopsis lyrata HOM05D006371 ORTHO05D008309 0.0e+00 1952.9 991 100.0
Carub.0003s2599 Capsella rubella HOM05D006371 ORTHO05D008309 0.0e+00 1766.9 995 90.7
Thhalv10002385m.g Eutrema salsugineum HOM05D006371 ORTHO05D008309 0.0e+00 1760.0 1015 89.7
Sp3g23150 Schrenkiella parvula HOM05D006371 ORTHO05D008309 0.0e+00 1750.7 1010 88.8
CARHR102110 Cardamine hirsuta HOM05D006371 ORTHO05D008309 0.0e+00 1731.1 995 89.4
BcaB06g26772 Brassica carinata HOM05D006371 ORTHO05D008309 0.0e+00 1716.8 1011 86.8
BcaC06g35860 Brassica carinata HOM05D006371 ORTHO05D008309 0.0e+00 1688.3 1012 86.4
C07p10340 Brassica napus HOM05D006371 ORTHO05D008309 0.0e+00 1684.1 1013 86.3
BraA07t28469Z Brassica rapa HOM05D006371 ORTHO05D008309 0.0e+00 1681.4 1016 85.7
BolC7t41483H Brassica oleracea HOM05D006371 ORTHO05D008309 0.0e+00 1674.8 1023 84.9
A07p06760 Brassica napus HOM05D006371 ORTHO05D008309 0.0e+00 1669.4 1013 85.5
Aa31sc575G10 Aethionema arabicum HOM05D006371 ORTHO05D008309 0.0e+00 1602.4 1010 82.4
THA.LOC104808834 Tarenaya hassleriana HOM05D006371 ORTHO05D008309 0.0e+00 1436.0 1025 74.0
AT2G04270 Arabidopsis thaliana HOM05D006371 ORTHO05D008309 0.0e+00 1333.5 714 96.2
QL04p067039 Quercus lobata HOM05D006371 ORTHO05D008309 0.0e+00 1114.0 998 60.0
Ciclev10014166m.g Citrus clementina HOM05D006371 ORTHO05D008309 0.0e+00 1113.6 957 62.6
Cfa014202 Carpinus fangiana HOM05D006371 ORTHO05D008309 0.0e+00 1108.2 991 59.8
CiPaw.03G283700 Carya illinoinensis HOM05D006371 ORTHO05D008309 0.0e+00 1106.7 1000 60.0
Gorai.007G165100 Gossypium raimondii HOM05D006371 ORTHO05D008309 0.0e+00 1101.3 1006 60.9
Gohir.A11G148000 Gossypium hirsutum HOM05D006371 ORTHO05D008309 0.0e+00 1097.4 981 62.1
Manes.12G064500 Manihot esculenta HOM05D006371 ORTHO05D008309 0.0e+00 1093.2 942 62.5
Gohir.D11G154800 Gossypium hirsutum HOM05D006371 ORTHO05D008309 0.0e+00 1090.1 1006 60.5
Potri.014G170300 Populus trichocarpa HOM05D006371 ORTHO05D008309 0.0e+00 1082.0 944 61.4
MD09G1130200 Malus domestica HOM05D006371 ORTHO05D008309 0.0e+00 1081.6 1022 58.4
Sabra14G0129800 Salix brachista HOM05D006371 ORTHO05D008309 1.4e-310 1069.7 947 61.4
Duzib133G1082 Durio zibethinus HOM05D006371 ORTHO05D008309 2.2e-308 1062.4 962 61.0
RcHm_v2.0_Chr2g0155641 Rosa chinensis HOM05D006371 ORTHO05D008309 2.4e-307 1058.9 1014 58.9
TWI36G0955 Tripterygium wilfordii HOM05D006371 ORTHO05D008309 1.5e-306 1056.2 974 59.5
Eucgr.A01367 Eucalyptus grandis HOM05D006371 ORTHO05D008309 1.0e-305 1053.5 960 59.9
Duzib211G0069 Durio zibethinus HOM05D006371 ORTHO05D008309 2.9e-305 1052.0 1015 58.4
CANSAT64G2089 Cannabis sativa HOM05D006371 ORTHO05D008309 1.1e-304 1050.0 1009 58.8
FAN14G0004 Fragaria x ananassa HOM05D006371 ORTHO05D008309 1.1e-304 1050.0 1005 58.4
Glyma.14G190200 Glycine max HOM05D006371 ORTHO05D008309 1.1e-304 1050.0 975 58.4
FvH4_6g40410 Fragaria vesca HOM05D006371 ORTHO05D008309 1.4e-304 1049.7 1005 58.4
MELO3C024185.2 Cucumis melo HOM05D006371 ORTHO05D008309 1.9e-304 1049.3 988 59.5
FAN02G4613 Fragaria x ananassa HOM05D006371 ORTHO05D008309 2.1e-303 1045.8 1005 58.3
arahy.Tifrunner.gnm1.ann1.BM1T67 Arachis hypogaea HOM05D006371 ORTHO05D008309 4.6e-303 1044.6 954 60.2
Lalb_Chr04g0252451 Lupinus albus HOM05D006371 ORTHO05D008309 7.9e-303 1043.9 979 57.6
FAN05G5438 Fragaria x ananassa HOM05D006371 ORTHO05D008309 3.9e-302 1041.6 1005 58.0
arahy.Tifrunner.gnm1.ann1.YIC3VW Arachis hypogaea HOM05D006371 ORTHO05D008309 1.5e-301 1039.6 954 59.9
PGR031G1410 Punica granatum HOM05D006371 ORTHO05D008309 2.8e-300 1035.4 970 59.2
Glyma.02G223400 Glycine max HOM05D006371 ORTHO05D008309 4.1e-299 1031.6 973 57.0
Nn1g07560 Nelumbo nucifera HOM05D006371 ORTHO05D008309 5.3e-299 1031.2 990 59.0
GSVIVG01030124001 Vitis vinifera HOM05D006371 ORTHO05D008309 4.5e-298 1028.1 1003 57.6
LjContig00155g0006571 Lotus japonicus HOM05D006371 ORTHO05D008309 5.9e-298 1027.7 980 57.2
CsaV3_2G010080 Cucumis sativus L. HOM05D006371 ORTHO05D008309 1.3e-297 1026.5 946 60.0
FAN09G0519 Fragaria x ananassa HOM05D006371 ORTHO05D008309 5.5e-296 1021.1 962 59.5
Prupe.3G194900 Prunus persica HOM05D006371 ORTHO05D008309 1.8e-294 1016.1 975 58.4
Thecc.01G199300 Theobroma cacao HOM05D006371 ORTHO05D008309 4.5e-290 1001.5 1009 57.3
PSO541G0072 Papaver somniferum HOM05D006371 ORTHO05D008309 1.5e-288 996.5 1026 55.2
PSO675G4792 Papaver somniferum HOM05D006371 ORTHO05D008309 1.0e-286 990.3 998 56.2
Ca_05557_v3 Cicer arietinum L. HOM05D006371 ORTHO05D008309 9.7e-285 983.8 965 56.2
COL.COLO4_19652 Corchorus olitorius HOM05D006371 ORTHO05D008309 5.3e-283 978.0 905 61.1
TPR.G13852 Trifolium pratense HOM05D006371 ORTHO05D008309 5.5e-280 968.0 958 55.3
Psat2g060760 Pisum sativum HOM05D006371 ORTHO05D008309 2.1e-279 966.1 966 55.3
TAR627G0565 Trochodendron aralioides HOM05D006371 ORTHO05D008309 2.0e-277 959.5 914 57.7
Aqoxy3G02224 Aquilegia oxysepala HOM05D006371 ORTHO05D008309 1.3e-273 946.8 946 56.7
CSS0032100 Camellia sinensis var. sinensis HOM05D006371 ORTHO05D008309 2.5e-272 942.6 902 58.5
ATR0751G221 Amborella trichopoda HOM05D006371 ORTHO05D008309 2.1e-271 939.5 1001 53.6
Medtr5g069430 Medicago truncatula HOM05D006371 ORTHO05D008309 4.9e-268 928.3 980 53.3
Dinv08538 Davidia involucrata HOM05D006371 ORTHO05D008309 2.8e-263 912.5 854 60.4
Dinv40160 Davidia involucrata HOM05D006371 ORTHO05D008309 3.4e-261 905.6 949 55.2
HPP92_003032 Vanilla planifolia HOM05D006371 ORTHO05D008309 1.1e-256 890.6 964 52.7
Actinidia02362 Actinidia chinensis HOM05D006371 ORTHO05D008309 1.5e-256 890.2 972 53.3
Sed0018275 Sechium edule HOM05D006371 ORTHO05D008309 1.9e-256 889.8 768 65.0
Cc07_g11500 Coffea canephora HOM05D006371 ORTHO05D008309 7.0e-251 871.3 942 54.2
ECA232G0409 Erigeron canadensis HOM05D006371 ORTHO05D008309 7.0e-251 871.3 903 56.1
Migut.D00896 Erythranthe guttata HOM05D006371 ORTHO05D008309 1.4e-246 857.1 839 59.2
Lj4C228G6 Lonicera japonica HOM05D006371 ORTHO05D008309 2.0e-245 853.2 1003 51.0
Os08g0323600 Oryza sativa ssp. japonica HOM05D006371 ORTHO05D008309 4.9e-244 848.6 1009 47.8
HanXRQChr09g0256951 Helianthus annuus HOM05D006371 ORTHO05D008309 1.1e-243 847.4 901 55.0
Ah.02g129050 Amaranthus hybridus HOM05D006371 ORTHO05D008309 2.7e-242 842.8 801 59.6
Sc07g0001260 Simmondsia chinensis HOM05D006371 ORTHO05D008309 7.8e-242 841.3 904 54.5
Solyc02g083140.3 Solanum lycopersicum HOM05D006371 ORTHO05D008309 5.1e-241 838.6 828 57.4
SalBow7G3887 Salvia bowleyana HOM05D006371 ORTHO05D008309 3.6e-239 832.4 958 53.0
Sopen02g027900 Solanum pennellii HOM05D006371 ORTHO05D008309 3.6e-239 832.4 778 59.9
PGSC0003DMG400001545 Solanum tuberosum HOM05D006371 ORTHO05D008309 1.8e-238 830.1 763 60.7
CAN.G890.8 Capsicum annuum HOM05D006371 ORTHO05D008309 5.2e-238 828.6 700 64.9
AUR62039632 Chenopodium quinoa HOM05D006371 ORTHO05D008309 1.2e-237 827.4 775 60.6
Lsat_1_v5_gn_4_142580 Lactuca sativa HOM05D006371 ORTHO05D008309 3.4e-237 825.9 939 52.7
MSTRG.10896 Avicennia marina HOM05D006371 ORTHO05D008309 5.8e-237 825.1 736 61.7
EL10Ac6g13348 Beta vulgaris HOM05D006371 ORTHO05D008309 1.4e-235 820.5 835 55.8
Nitab4.5_0005413g0050 Nicotiana tabacum HOM05D006371 ORTHO05D008309 3.6e-231 805.8 773 59.2
AUR62040011 Chenopodium quinoa HOM05D006371 ORTHO05D008309 1.4e-230 803.9 717 62.5
Peaxi162Scf00300g00515 Petunia axillaris HOM05D006371 ORTHO05D008309 1.4e-230 803.9 908 53.1
ECA238G3451 Erigeron canadensis HOM05D006371 ORTHO05D008309 3.5e-226 789.3 903 54.2
Cpa.g.sc136.51 Carica papaya HOM05D006371 ORTHO05D008309 3.6e-223 779.2 596 71.1
MBI15_g38530_MAGBIO Magnolia biondii HOM05D006371 ORTHO05D008309 9.0e-222 774.6 764 57.6
Phvul.008G190000 Phaseolus vulgaris HOM05D006371 ORTHO05D008309 4.9e-220 768.8 763 55.2
ClCG02G003000 Citrullus lanatus HOM05D006371 ORTHO05D008309 2.3e-217 760.0 820 53.8
Hund03659 Selenicereus undatus HOM05D006371 ORTHO05D008309 1.7e-212 743.8 972 47.1
Zm00001eb038720 Zea mays HOM05D006371 ORTHO05D008309 6.7e-209 731.9 703 56.5
Oeu049652.2 Olea europaea HOM05D006371 ORTHO05D008309 2.5e-208 729.9 1020 46.8
SGA_v2.0_scaffold68G22808 Striga asiatica HOM05D006371 ORTHO05D008309 6.2e-207 725.3 957 47.5
Atru.chr6.3429 Acer truncatum HOM05D006371 ORTHO05D008309 9.3e-203 711.4 676 57.2
Hund03661 Selenicereus undatus HOM05D006371 ORTHO05D008309 3.9e-193 679.5 755 54.0
unitig_748.g7080 Utricularia gibba HOM05D006371 ORTHO05D005825 1.7e-191 674.1 691 58.0
Haze_12588 Corylus avellana HOM05D006371 ORTHO05D008309 8.2e-191 671.8 713 52.6
CDE02G2282 Ceratophyllum demersum HOM05D006371 ORTHO05D008309 3.8e-188 662.9 772 49.6
Mapoly0111s0056 Marchantia polymorpha HOM05D006371 ORTHO05D008309 1.5e-176 624.4 896 42.4
Hma1.2p1_0315F.1_g122770 Hydrangea macrophylla HOM05D006371 ORTHO05D008309 5.0e-172 609.4 714 50.6
vmacro20507 Vaccinium macrocarpon HOM05D006371 ORTHO05D008309 3.0e-161 573.5 1049 38.9
Nitab4.5_0023804g0010 Nicotiana tabacum HOM05D006371 ORTHO05D008309 1.8e-158 564.3 556 57.6
AagrBONN_evm.TU.Sc2ySwM_368.983 Anthoceros agrestis HOM05D006371 ORTHO05D008309 2.8e-154 550.4 967 38.0
DCAR_023137 Daucus carota HOM05D006371 ORTHO05D008309 2.8e-151 540.4 650 52.3
Pp3c4_14910 Physcomitrium patens HOM05D006371 ORTHO05D008309 1.0e-145 521.9 739 41.3
Rhsim10G0203500 Rhododendron simsii HOM05D006371 ORTHO05D008309 7.3e-139 499.2 1118 34.6
SMO117G0275 Selaginella moellendorffii HOM05D006371 ORTHO05D008309 2.5e-123 447.6 554 46.0
Haze_12589 Corylus avellana HOM05D006371 ORTHO05D008309 2.0e-88 331.6 426 49.8
SEGI_21719 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 2.2e-63 248.4 214 61.2
AUR62026198 Chenopodium quinoa HOM05D006371 ORTHO05D008309 5.7e-59 233.8 246 53.7
Ca_28887_v3 Cicer arietinum L. HOM05D006371 ORTHO05D008309 2.6e-51 208.4 412 31.8
MD17G1105600 Malus domestica HOM05D006371 ORTHO05D008309 5.0e-47 194.1 197 58.4
MCO12G287 Micromonas commoda HOM05D006371 ORTHO05D008309 1.2e-40 172.9 317 33.8
SEGI_30134 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 1.6e-29 136.0 538 27.0
CBR_g28919 Chara braunii HOM05D006371 ORTHO05D000048 1.3e-23 116.3 114 55.3
SEGI_19700 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 8.9e-20 103.6 76 68.4
AUR62026199 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.9e-14 85.9 63 69.8
CBR_g28922 Chara braunii HOM05D000019 ORTHO05D000048 4.3e-14 84.7 265 29.1
CBR_g28910 Chara braunii HOM05D000019 ORTHO05D000048 5.6e-14 84.3 130 41.5
MD17G1105400 Malus domestica HOM05D006371 ORTHO05D008309 1.5e-11 76.3 87 51.7
MD17G1105500 Malus domestica HOM05D006371 ORTHO05D008309 2.6e-11 75.5 41 92.7
FAN09G2267 Fragaria x ananassa HOM05D006371 ORTHO05D008309 3.7e-10 71.6 71 43.7
AUR62026201 Chenopodium quinoa HOM05D006371 ORTHO05D008309 3.2e-09 68.6 38 89.5
CSS0035540 Camellia sinensis var. sinensis HOM05D006371 ORTHO05D008309 2.7e-08 65.5 86 34.9
Gohir.D11G348800 Gossypium hirsutum HOM05D003809 ORTHO05D003935 2.5e-06 58.9 88 28.4
Gorai.007G379100 Gossypium raimondii HOM05D003809 ORTHO05D003935 2.5e-06 58.9 88 28.4
Sc07g0006540 Simmondsia chinensis HOM05D003809 ORTHO05D003935 7.3e-06 57.4 72 36.1
Lalb_Chr19g0124721 Lupinus albus HOM05D003809 ORTHO05D003935 9.6e-06 57.0 137 27.7


User provided reference genes

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