Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G41080 Arabidopsis lyrata HOM05D007289 ORTHO05D009215 6.1e-197 690.6 357 100.0
AT1G80420 Arabidopsis thaliana HOM05D007289 ORTHO05D009215 1.4e-169 599.7 361 87.3
Carub.0002s2715 Capsella rubella HOM05D007289 ORTHO05D009215 5.6e-158 561.2 372 81.5
Thhalv10018735m.g Eutrema salsugineum HOM05D007289 ORTHO05D009215 3.6e-157 558.5 372 81.2
CARHR074820 Cardamine hirsuta HOM05D007289 ORTHO05D009215 1.9e-150 536.2 367 80.9
Sp5g35390 Schrenkiella parvula HOM05D007289 ORTHO05D009215 8.1e-149 530.8 366 79.2
C02p37330 Brassica napus HOM05D007289 ORTHO05D009215 9.6e-142 507.3 357 78.2
BcaC03g15968 Brassica carinata HOM05D007289 ORTHO05D009215 4.8e-141 505.0 357 77.6
BolC2t09743H Brassica oleracea HOM05D007289 ORTHO05D009215 1.4e-140 503.4 357 77.3
A02p23560 Brassica napus HOM05D007289 ORTHO05D009215 4.0e-140 501.9 359 76.3
BraA02t07349Z Brassica rapa HOM05D007289 ORTHO05D009215 4.0e-140 501.9 359 76.3
Aa31LG4G690 Aethionema arabicum HOM05D007289 ORTHO05D009215 1.7e-138 496.5 375 73.3
THA.LOC104808206 Tarenaya hassleriana HOM05D007289 ORTHO05D009215 1.4e-119 433.7 368 65.8
BcaB05g25270 Brassica carinata HOM05D002927 ORTHO05D003841 2.3e-119 433.0 364 68.7
Prupe.3G073900 Prunus persica HOM05D007289 ORTHO05D009215 4.4e-102 375.6 362 59.4
CSS0039074 Camellia sinensis var. sinensis HOM05D007289 ORTHO05D009215 1.3e-98 364.0 378 55.6
Ciclev10025766m.g Citrus clementina HOM05D007289 ORTHO05D009215 1.3e-98 364.0 370 57.0
MD17G1197800 Malus domestica HOM05D007289 ORTHO05D009215 3.8e-98 362.5 373 57.6
FvH4_6g30910 Fragaria vesca HOM05D007289 ORTHO05D009215 5.5e-97 358.6 357 59.7
TWI75G1369 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 1.4e-95 354.0 355 57.2
TAR383G0594 Trochodendron aralioides HOM05D007289 ORTHO05D009215 2.3e-95 353.2 385 56.1
FAN02G0535 Fragaria x ananassa HOM05D007289 ORTHO05D009215 3.0e-95 352.8 367 57.2
Dinv30529 Davidia involucrata HOM05D007289 ORTHO05D009215 1.5e-94 350.5 386 52.8
RcHm_v2.0_Chr2g0137421 Rosa chinensis HOM05D007289 ORTHO05D009215 2.6e-94 349.7 372 55.9
Nitab4.5_0002327g0060 Nicotiana tabacum HOM05D007289 ORTHO05D009215 1.4e-92 344.0 358 54.5
Thecc.06G082700 Theobroma cacao HOM05D007289 ORTHO05D009215 1.4e-92 344.0 367 55.3
Gohir.A02G122500 Gossypium hirsutum HOM05D007289 ORTHO05D009215 2.4e-92 343.2 358 53.9
Gorai.002G058300 Gossypium raimondii HOM05D007289 ORTHO05D009215 3.5e-91 339.3 360 53.3
vmacro18934 Vaccinium macrocarpon HOM05D007289 ORTHO05D009215 4.5e-91 339.0 378 52.6
CiPaw.02G152300 Carya illinoinensis HOM05D007289 ORTHO05D009215 7.7e-91 338.2 335 54.3
CsaV3_7G033000 Cucumis sativus L. HOM05D007289 ORTHO05D009215 7.7e-91 338.2 371 53.6
PGSC0003DMG400016511 Solanum tuberosum HOM05D007289 ORTHO05D009215 1.3e-90 337.4 369 53.1
Aqoxy7G01850 Aquilegia oxysepala HOM05D007289 ORTHO05D009215 2.2e-90 336.7 380 51.8
MELO3C023367.2 Cucumis melo HOM05D007289 ORTHO05D009215 5.0e-90 335.5 370 53.2
Lalb_Chr22g0351171 Lupinus albus HOM05D007289 ORTHO05D009215 5.0e-90 335.5 367 54.2
Atru.chr1.3224 Acer truncatum HOM05D007289 ORTHO05D009215 8.5e-90 334.7 383 52.0
COL.COLO4_30328 Corchorus olitorius HOM05D007289 ORTHO05D009215 2.5e-89 333.2 361 53.7
PGR102G0666 Punica granatum HOM05D007289 ORTHO05D009215 2.5e-89 333.2 360 54.4
Potri.001G178100 Populus trichocarpa HOM05D007289 ORTHO05D009215 4.2e-89 332.4 362 51.9
QL05p025382 Quercus lobata HOM05D007289 ORTHO05D009215 4.2e-89 332.4 374 52.1
Phvul.005G172600 Phaseolus vulgaris HOM05D007289 ORTHO05D009215 7.2e-89 331.6 367 52.6
Lalb_Chr14g0373531 Lupinus albus HOM05D007289 ORTHO05D009215 1.2e-88 330.9 363 53.4
Solyc06g066780.3 Solanum lycopersicum HOM05D007289 ORTHO05D009215 1.6e-88 330.5 366 50.8
Rhsim08G0218600 Rhododendron simsii HOM05D007289 ORTHO05D009215 6.1e-88 328.6 393 50.1
Sopen06g025060 Solanum pennellii HOM05D007289 ORTHO05D009215 8.0e-88 328.2 369 51.2
Manes.04G121300 Manihot esculenta HOM05D007289 ORTHO05D009215 1.4e-87 327.4 368 50.8
Hund06601 Selenicereus undatus HOM05D007289 ORTHO05D009215 1.4e-87 327.4 385 50.6
arahy.Tifrunner.gnm1.ann1.HRS6MU Arachis hypogaea HOM05D007289 ORTHO05D009215 1.8e-87 327.0 360 52.8
arahy.Tifrunner.gnm1.ann1.UJ7D22 Arachis hypogaea HOM05D007289 ORTHO05D009215 1.8e-87 327.0 360 52.8
CANSAT56G1700 Cannabis sativa HOM05D007289 ORTHO05D009215 1.8e-87 327.0 372 52.2
PSO782G0119 Papaver somniferum HOM05D007289 ORTHO05D009215 1.8e-87 327.0 364 50.8
Sed0021795 Sechium edule HOM05D007289 ORTHO05D009215 3.0e-87 326.2 371 51.2
Lj3g0010801 Lotus japonicus HOM05D007289 ORTHO05D009215 6.8e-87 325.1 373 50.9
TPR.G37243 Trifolium pratense HOM05D007289 ORTHO05D009215 8.8e-87 324.7 369 51.8
Cfa002049 Carpinus fangiana HOM05D007289 ORTHO05D009215 1.5e-86 323.9 361 53.5
VMungo1080G1522 Vigna mungo HOM05D007289 ORTHO05D009215 2.0e-86 323.6 371 50.4
DCAR_016227 Daucus carota HOM05D007289 ORTHO05D009215 2.6e-86 323.2 361 51.5
Lsat_1_v5_gn_4_103480 Lactuca sativa HOM05D007289 ORTHO05D009215 2.6e-86 323.2 370 50.0
Lj9C506T12 Lonicera japonica HOM05D007289 ORTHO05D009215 3.4e-86 322.8 385 50.4
Cc04_g03590 Coffea canephora HOM05D007289 ORTHO05D009215 5.7e-86 322.0 365 51.0
CAN.G395.19 Capsicum annuum HOM05D007289 ORTHO05D009215 9.8e-86 321.2 357 51.5
Ca_01106_v3 Cicer arietinum L. HOM05D007289 ORTHO05D009215 9.8e-86 321.2 373 51.2
Glyma.13G360800 Glycine max HOM05D007289 ORTHO05D009215 1.7e-85 320.5 369 50.1
Sabra01G0148500 Salix brachista HOM05D007289 ORTHO05D009215 1.7e-85 320.5 362 50.3
Psat5g299280 Pisum sativum HOM05D007289 ORTHO05D009215 2.8e-85 319.7 372 51.3
MBI04_g26647_MAGBIO Magnolia biondii HOM05D007289 ORTHO05D009215 4.9e-85 318.9 362 51.1
FAN09G0173 Fragaria x ananassa HOM05D007289 ORTHO05D009215 6.3e-85 318.5 335 56.4
Os06g0144000 Oryza sativa ssp. japonica HOM05D007289 ORTHO05D009215 2.4e-84 316.6 357 51.0
Oeu033497.1 Olea europaea HOM05D007289 ORTHO05D009215 7.0e-84 315.1 366 53.0
Medtr2g102430 Medicago truncatula HOM05D007289 ORTHO05D009215 1.2e-83 314.3 364 50.0
Peaxi162Scf00207g00834 Petunia axillaris HOM05D007289 ORTHO05D009215 1.2e-83 314.3 305 55.1
MSTRG.11091 Avicennia marina HOM05D007289 ORTHO05D009215 2.0e-83 313.5 370 48.4
Sc12g0009160 Simmondsia chinensis HOM05D007289 ORTHO05D009215 1.0e-82 311.2 379 50.4
HanXRQChr16g0501051 Helianthus annuus HOM05D007289 ORTHO05D009215 2.3e-82 310.1 358 50.3
AUR62016430 Chenopodium quinoa HOM05D007289 ORTHO05D009215 6.6e-82 308.5 380 48.4
GSVIVG01017153001 Vitis vinifera HOM05D007289 ORTHO05D009215 6.6e-82 308.5 319 54.9
Migut.I00845 Erythranthe guttata HOM05D007289 ORTHO05D009215 1.1e-81 307.8 363 49.0
AUR62011614 Chenopodium quinoa HOM05D007289 ORTHO05D009215 5.6e-81 305.4 378 47.4
ECA232G0523 Erigeron canadensis HOM05D007289 ORTHO05D009215 5.6e-81 305.4 350 50.9
Duzib235G0864 Durio zibethinus HOM05D007289 ORTHO05D009215 9.2e-76 288.1 371 49.9
EL10Ac9g21988 Beta vulgaris HOM05D007289 ORTHO05D009215 1.6e-72 277.3 442 43.4
Nn8g39279 Nelumbo nucifera HOM05D007289 ORTHO05D009215 4.7e-72 275.8 346 48.3
ATR0037G063 Amborella trichopoda HOM05D007289 ORTHO05D009215 1.0e-71 274.6 396 44.7
Actinidia15825 Actinidia chinensis HOM05D002927 ORTHO05D003841 6.4e-69 265.4 344 49.1
CDE02G4373 Ceratophyllum demersum HOM05D004733 ORTHO05D005925 1.6e-67 260.8 391 41.7
PSO339G0085 Papaver somniferum HOM05D007289 ORTHO05D009215 4.6e-67 259.2 273 51.3
Cpa.g.sc10.164 Carica papaya HOM05D007289 ORTHO05D009215 8.6e-66 255.0 288 51.4
SEGI_14605 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 1.7e-61 240.7 365 41.1
SalBow2G1977 Salvia bowleyana HOM05D007289 ORTHO05D009215 3.7e-61 239.6 368 41.6
HPP92_000676 Vanilla planifolia HOM05D007289 ORTHO05D009215 3.5e-59 233.0 270 47.0
Haze_16457 Corylus avellana HOM05D007289 ORTHO05D009215 3.4e-54 216.5 544 32.7
Pp3c15_20480 Physcomitrium patens HOM05D007289 ORTHO05D009215 1.0e-50 204.9 313 37.7
Glyma.15G013100 Glycine max HOM05D007289 ORTHO05D009215 5.6e-49 199.1 235 50.2
Mapoly0044s0047 Marchantia polymorpha HOM05D007289 ORTHO05D009215 2.8e-48 196.8 341 36.7
Gohir.D03G073900 Gossypium hirsutum HOM05D007289 ORTHO05D009215 3.8e-45 186.4 182 58.2
ClCG09G002310 Citrullus lanatus HOM05D007289 ORTHO05D009215 4.2e-44 183.0 174 57.5
FAN05G4017 Fragaria x ananassa HOM05D007289 ORTHO05D009215 7.8e-43 178.7 195 56.4
FAN05G4871 Fragaria x ananassa HOM05D007289 ORTHO05D009215 2.3e-42 177.2 146 63.7
TWI12G0812 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 4.5e-38 162.9 198 48.0
Nitab4.5_0021849g0010 Nicotiana tabacum HOM05D007289 ORTHO05D009215 4.9e-37 159.5 204 46.6
SEGI_13111 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 1.9e-36 157.5 179 49.7
Eucgr.F03006 Eucalyptus grandis HOM05D007289 ORTHO05D009215 7.1e-36 155.6 224 42.0
unitig_21.g20513 Utricularia gibba HOM05D007289 ORTHO05D009215 4.3e-33 146.4 374 33.7
Zm00001eb377280 Zea mays HOM05D007289 ORTHO05D009215 1.4e-31 141.4 199 46.2
CBR_g23739 Chara braunii HOM05D007289 ORTHO05D009215 7.6e-30 135.6 101 56.4
ClCG09G002320 Citrullus lanatus HOM05D007289 ORTHO05D009215 3.3e-25 120.2 246 37.8
Hma1.2p1_0845F.1_g227540 Hydrangea macrophylla HOM05D007289 ORTHO05D009215 1.0e-21 108.6 106 57.5
Lj2P1136T43 Lonicera japonica HOM05D007289 ORTHO05D009215 4.2e-20 103.2 112 50.0
Ah.01g011120 Amaranthus hybridus HOM05D007289 ORTHO05D009215 5.1e-18 96.3 146 42.5
Pp3c21_18730 Physcomitrium patens HOM05D007289 ORTHO05D009215 2.8e-08 63.9 121 31.4


User provided reference genes

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