Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G22890 Arabidopsis lyrata HOM05D004511 ORTHO05D005348 8.8e-184 646.7 310 100.0
Carub.0003s2466 Capsella rubella HOM05D004511 ORTHO05D005348 1.1e-136 490.3 281 86.1
Sp3g22130 Schrenkiella parvula HOM05D004511 ORTHO05D005348 1.5e-135 486.5 281 85.1
A07p07990 Brassica napus HOM05D004511 ORTHO05D005348 2.6e-135 485.7 284 84.2
BraA07t28586Z Brassica rapa HOM05D004511 ORTHO05D005348 2.6e-135 485.7 284 84.2
AT3G24320 Arabidopsis thaliana HOM05D004511 ORTHO05D005348 4.4e-135 485.0 281 84.7
BcaC06g35683 Brassica carinata HOM05D004511 ORTHO05D005348 5.8e-135 484.6 281 85.1
C07p12050 Brassica napus HOM05D004511 ORTHO05D005348 5.8e-135 484.6 281 85.1
BolC7t41673H Brassica oleracea HOM05D004511 ORTHO05D005348 5.8e-135 484.6 281 85.1
BcaB06g26614 Brassica carinata HOM05D004511 ORTHO05D005348 2.2e-134 482.6 281 84.7
CARHR100420 Cardamine hirsuta HOM05D004511 ORTHO05D005348 1.1e-133 480.3 281 84.0
Thhalv10002376m.g Eutrema salsugineum HOM05D004511 ORTHO05D005348 2.4e-133 479.2 281 83.6
Aa31LG8G11050 Aethionema arabicum HOM05D004511 ORTHO05D005348 3.5e-132 475.3 281 82.6
THA.LOC104821629 Tarenaya hassleriana HOM05D004511 ORTHO05D005348 2.4e-125 452.6 281 77.6
Dinv29796 Davidia involucrata HOM05D004511 ORTHO05D005348 1.4e-120 436.8 281 74.0
AL3G39770 Arabidopsis lyrata HOM05D004511 ORTHO05D005348 6.9e-120 434.5 256 84.0
Potri.010G065000 Populus trichocarpa HOM05D004511 ORTHO05D005348 4.5e-119 431.8 284 73.2
Sc11g0002730 Simmondsia chinensis HOM05D004511 ORTHO05D005348 6.4e-118 427.9 284 72.5
MD13G1223200 Malus domestica HOM05D004511 ORTHO05D005348 2.4e-117 426.0 284 72.9
CANSAT78G2334 Cannabis sativa HOM05D004511 ORTHO05D005348 4.2e-117 425.2 281 70.8
Migut.G00563 Erythranthe guttata HOM05D004511 ORTHO05D005348 4.2e-117 425.2 281 71.9
CiPaw.01G177000 Carya illinoinensis HOM05D004511 ORTHO05D005348 7.1e-117 424.5 281 73.7
FvH4_4g05000 Fragaria vesca HOM05D004511 ORTHO05D005348 1.2e-116 423.7 284 72.5
Nitab4.5_0005154g0040 Nicotiana tabacum HOM05D004511 ORTHO05D005348 1.2e-116 423.7 281 72.6
RcHm_v2.0_Chr4g0395811 Rosa chinensis HOM05D004511 ORTHO05D005348 2.1e-116 422.9 284 73.2
Prupe.1G050200 Prunus persica HOM05D004511 ORTHO05D005348 2.7e-116 422.5 284 72.9
Ciclev10004190m.g Citrus clementina HOM05D004511 ORTHO05D005348 4.6e-116 421.8 281 71.9
Duzib151G0197 Durio zibethinus HOM05D004511 ORTHO05D005348 6.0e-116 421.4 284 72.2
Nitab4.5_0001041g0180 Nicotiana tabacum HOM05D004511 ORTHO05D005348 7.9e-116 421.0 281 71.9
TWI73G0808 Tripterygium wilfordii HOM05D004511 ORTHO05D005348 7.9e-116 421.0 283 72.1
FAN12G0867 Fragaria x ananassa HOM05D004511 ORTHO05D005348 1.0e-115 420.6 284 72.2
QL06p021350 Quercus lobata HOM05D004511 ORTHO05D005348 1.0e-115 420.6 284 72.9
MSTRG.9851 Avicennia marina HOM05D004511 ORTHO05D005348 1.3e-115 420.2 281 70.8
Thecc.04G266800 Theobroma cacao HOM05D004511 ORTHO05D005348 1.8e-115 419.9 284 72.5
SGA_v2.0_scaffold67G22677 Striga asiatica HOM05D004511 ORTHO05D005348 2.3e-115 419.5 281 70.8
Sed0014740 Sechium edule HOM05D004511 ORTHO05D005348 1.9e-114 416.4 284 70.8
EL10Ac9g21855 Beta vulgaris HOM05D004511 ORTHO05D005348 5.6e-114 414.8 311 65.6
GSVIVG01027931001 Vitis vinifera HOM05D004511 ORTHO05D005348 7.4e-114 414.5 284 70.8
Cc03_g06420 Coffea canephora HOM05D004511 ORTHO05D005348 1.3e-113 413.7 281 70.8
Ah.01g020260 Amaranthus hybridus HOM05D004511 ORTHO05D005348 2.1e-113 412.9 284 70.1
AUR62011461 Chenopodium quinoa HOM05D004511 ORTHO05D005348 6.2e-113 411.4 281 69.8
Eucgr.H02905 Eucalyptus grandis HOM05D004511 ORTHO05D005348 6.2e-113 411.4 280 71.1
arahy.Tifrunner.gnm1.ann1.QET6JI Arachis hypogaea HOM05D004511 ORTHO05D005348 1.1e-112 410.6 284 71.1
PGR004G0717 Punica granatum HOM05D004511 ORTHO05D005348 1.1e-112 410.6 284 70.1
Lalb_Chr02g0150721 Lupinus albus HOM05D004511 ORTHO05D005348 1.4e-112 410.2 281 70.8
Gohir.A09G230900 Gossypium hirsutum HOM05D004511 ORTHO05D005348 1.8e-112 409.8 284 71.8
TAR365G1143 Trochodendron aralioides HOM05D004511 ORTHO05D005348 2.4e-112 409.5 284 70.1
Atru.chr4.1900 Acer truncatum HOM05D004511 ORTHO05D005348 3.1e-112 409.1 271 73.1
arahy.Tifrunner.gnm1.ann1.Z900IQ Arachis hypogaea HOM05D004511 ORTHO05D005348 5.3e-112 408.3 284 70.4
Solyc09g090870.3 Solanum lycopersicum HOM05D004511 ORTHO05D005348 6.9e-112 407.9 281 70.1
ClCG05G003940 Citrullus lanatus HOM05D004511 ORTHO05D005348 1.5e-111 406.8 284 69.4
CsaV3_3G011610 Cucumis sativus L. HOM05D004511 ORTHO05D005348 1.5e-111 406.8 284 70.1
Sopen09g033830 Solanum pennellii HOM05D004511 ORTHO05D005348 1.5e-111 406.8 281 70.1
unitig_747.g21671 Utricularia gibba HOM05D004511 ORTHO05D005348 1.5e-111 406.8 295 68.8
COL.COLO4_15984 Corchorus olitorius HOM05D004511 ORTHO05D005348 2.0e-111 406.4 301 68.4
Oeu061869.1 Olea europaea HOM05D004511 ORTHO05D005348 2.6e-111 406.0 271 72.7
DCAR_027355 Daucus carota HOM05D004511 ORTHO05D005348 3.4e-111 405.6 281 69.4
Gorai.006G254800 Gossypium raimondii HOM05D004511 ORTHO05D005348 3.4e-111 405.6 284 71.1
Nn1g02989 Nelumbo nucifera HOM05D004511 ORTHO05D005348 7.6e-111 404.4 288 65.6
Aqoxy5G00136 Aquilegia oxysepala HOM05D004511 ORTHO05D005348 1.7e-110 403.3 281 68.7
Gohir.D09G232000 Gossypium hirsutum HOM05D004511 ORTHO05D005348 2.9e-110 402.5 284 70.8
AUR62016594 Chenopodium quinoa HOM05D004511 ORTHO05D005348 1.9e-109 399.8 278 68.3
MELO3C006369.2 Cucumis melo HOM05D004511 ORTHO05D005348 7.1e-109 397.9 291 67.7
PSO210G5810 Papaver somniferum HOM05D004511 ORTHO05D005348 2.7e-108 396.0 289 64.7
Lj6g0021678 Lotus japonicus HOM05D004511 ORTHO05D005348 7.9e-108 394.4 291 66.0
HanXRQChr06g0182821 Helianthus annuus HOM05D004511 ORTHO05D005348 1.3e-107 393.7 284 68.3
ECA248G2418 Erigeron canadensis HOM05D004511 ORTHO05D005348 8.7e-107 391.0 284 65.1
PSO170G1037 Papaver somniferum HOM05D004511 ORTHO05D005348 8.7e-107 391.0 289 64.0
Os04g0507000 Oryza sativa ssp. japonica HOM05D004511 ORTHO05D005348 2.5e-106 389.4 290 64.8
Actinidia27093 Actinidia chinensis HOM05D004511 ORTHO05D005348 3.3e-106 389.0 284 68.0
Glyma.10G130700 Glycine max HOM05D004511 ORTHO05D005348 7.4e-106 387.9 294 65.0
HPP92_015182 Vanilla planifolia HOM05D004511 ORTHO05D005348 9.7e-106 387.5 284 65.5
Glyma.20G073500 Glycine max HOM05D004511 ORTHO05D005348 1.3e-105 387.1 291 65.6
Zm00001eb426210 Zea mays HOM05D004511 ORTHO05D005348 1.3e-105 387.1 290 65.2
Peaxi162Scf00531g00610 Petunia axillaris HOM05D004511 ORTHO05D005348 4.8e-105 385.2 278 66.9
Lsat_1_v5_gn_2_41221 Lactuca sativa HOM05D004511 ORTHO05D005348 6.3e-105 384.8 299 63.2
Phvul.007G232900 Phaseolus vulgaris HOM05D004511 ORTHO05D005348 3.4e-103 379.0 294 63.3
HanXRQChr01g0023051 Helianthus annuus HOM05D004511 ORTHO05D005348 4.5e-103 378.6 284 63.7
Medtr1g045670 Medicago truncatula HOM05D004511 ORTHO05D005348 5.9e-103 378.3 281 66.2
Psat6g108520 Pisum sativum HOM05D004511 ORTHO05D005348 1.0e-102 377.5 284 66.2
ATR0787G210 Amborella trichopoda HOM05D004511 ORTHO05D005348 3.2e-101 372.5 284 63.0
SEGI_11740 Sequoiadendron giganteum HOM05D004511 ORTHO05D005348 8.2e-97 357.8 281 61.2
Rhsim04G0171100 Rhododendron simsii HOM05D004511 ORTHO05D005348 5.7e-90 335.1 314 55.4
Mapoly0067s0046 Marchantia polymorpha HOM05D004511 ORTHO05D005348 4.1e-88 328.9 285 55.1
SMO364G0324 Selaginella moellendorffii HOM05D004511 ORTHO05D005348 3.0e-83 312.8 283 53.7
CSS0022858 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 8.2e-81 304.7 166 81.9
CSS0015875 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 1.6e-79 300.4 172 78.5
Lj6A637T63 Lonicera japonica HOM05D004511 ORTHO05D005348 2.1e-76 290.0 213 66.2
Ca_11884_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 2.7e-76 289.7 281 53.7
Pp3c8_22090 Physcomitrium patens HOM05D004511 ORTHO05D005348 2.7e-76 289.7 291 49.1
vmacro08562 Vaccinium macrocarpon HOM05D004511 ORTHO05D005348 3.6e-76 289.3 166 77.7
Hund00489 Selenicereus undatus HOM05D004511 ORTHO05D005348 5.2e-75 285.4 207 63.8
TPR.G23996 Trifolium pratense HOM05D004511 ORTHO05D005348 1.2e-74 284.3 219 62.6
CAN.G524.10 Capsicum annuum HOM05D004511 ORTHO05D005348 4.4e-74 282.3 166 74.7
Pp3c23_17640 Physcomitrium patens HOM05D004511 ORTHO05D005348 2.2e-73 280.0 294 46.9
FAN17G0167 Fragaria x ananassa HOM05D004511 ORTHO05D005348 1.3e-65 254.2 227 58.1
Ca_07387_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 1.2e-63 247.7 281 50.5
SHI00812 Sapria himalayana HOM05D004511 ORTHO05D005348 2.3e-62 243.4 172 62.8
Hund00476 Selenicereus undatus HOM05D004511 ORTHO05D005348 2.5e-61 240.0 142 74.6
CDE08G1197 Ceratophyllum demersum HOM05D004511 ORTHO05D005348 4.7e-60 235.7 166 65.1
Manes.03G157900 Manihot esculenta HOM05D004511 ORTHO05D005348 4.0e-59 232.6 142 75.4
Ca_26419_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 3.4e-58 229.6 278 47.5
FAN22G0933 Fragaria x ananassa HOM05D004511 ORTHO05D005348 2.1e-52 210.3 148 67.6
VMungo0720G0419 Vigna mungo HOM05D004511 ORTHO05D005348 2.4e-40 170.2 167 52.1
CBR_g22304 Chara braunii HOM05D000019 ORTHO05D000002 4.6e-39 166.0 170 46.5
PRCOL_00002937 Prasinoderma coloniale HOM05D004511 ORTHO05D005348 4.0e-35 152.9 256 39.5
vmacro08561 Vaccinium macrocarpon HOM05D004511 ORTHO05D005348 1.7e-33 147.5 98 70.4
Hund00475 Selenicereus undatus HOM05D004511 ORTHO05D005348 2.9e-33 146.7 87 80.5
VMungo0720G1651 Vigna mungo HOM05D004511 ORTHO05D005348 5.1e-30 136.0 87 72.4
SHI00817 Sapria himalayana HOM05D004511 ORTHO05D005348 1.1e-29 134.8 86 75.6
Solyc09g090890.3 Solanum lycopersicum HOM05D004511 ORTHO05D005348 1.2e-28 131.3 98 65.3
Glyma.10G121560 Glycine max HOM05D004511 ORTHO05D005348 2.8e-28 130.2 87 71.3
Glyma.10G121578 Glycine max HOM05D004511 ORTHO05D005348 4.7e-28 129.4 87 71.3
Glyma.10G121584 Glycine max HOM05D004511 ORTHO05D005348 8.1e-28 128.6 87 70.1
Haze_11474 Corylus avellana HOM05D004511 ORTHO05D005348 1.4e-27 127.9 92 67.4
Glyma.10G121600 Glycine max HOM05D004511 ORTHO05D005348 2.4e-27 127.1 87 71.3
CSS0045058 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 5.2e-27 125.9 76 78.9
CSS0023992 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 1.5e-26 124.4 76 77.6
MCO07G727 Micromonas commoda HOM05D004511 ORTHO05D005348 1.3e-25 121.3 304 31.9
Ca_30594_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 1.6e-23 114.4 77 72.7
Sopen09g033860 Solanum pennellii HOM05D004511 ORTHO05D005348 6.0e-23 112.5 101 59.4
SEGI_26830 Sequoiadendron giganteum HOM05D004511 ORTHO05D005348 3.0e-22 110.2 77 64.9
Lj6A637T62 Lonicera japonica HOM05D004511 ORTHO05D005348 5.1e-22 109.4 67 80.6
CDE08G1007 Ceratophyllum demersum HOM05D004511 ORTHO05D005348 3.0e-14 83.6 40 90.0
Cpa.g.c32688 Carica papaya HOM05D004511 ORTHO05D005348 6.6e-14 82.4 40 87.5
TPR.G7054 Trifolium pratense HOM05D004511 ORTHO05D005348 2.4e-11 73.9 54 64.8
Atru.chr4.2015 Acer truncatum HOM05D004511 ORTHO05D005348 3.4e-10 70.1 33 87.9
Ca_21499_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 5.4e-08 62.8 29 89.7
Cre06.g250850 Chlamydomonas reinhardtii HOM05D004511 ORTHO05D005348 1.2e-07 61.6 220 32.3
Lsat_1_v5_gn_1_68561 Lactuca sativa HOM05D004511 ORTHO05D005348 1.2e-07 61.6 53 62.3
ATR0787G159 Amborella trichopoda HOM05D004511 ORTHO05D005348 2.1e-07 60.8 39 66.7


User provided reference genes

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