Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p18310 Brassica napus HOM05D005583 ORTHO05D006507 4.0e-76 288.1 154 100.0
BraA07t28693Z Brassica rapa HOM05D005583 ORTHO05D006507 1.3e-74 283.1 154 98.7
A06p40700 Brassica napus HOM05D005583 ORTHO05D006507 5.6e-46 188.0 195 62.1
BolC7t43741H Brassica oleracea HOM05D005583 ORTHO05D006507 5.6e-46 188.0 187 64.7
BraA06t26991Z Brassica rapa HOM05D005583 ORTHO05D006507 5.6e-46 188.0 195 62.1
BcaC06g33760 Brassica carinata HOM05D005583 ORTHO05D006507 3.4e-43 178.7 195 60.0
C07p37240 Brassica napus HOM05D005583 ORTHO05D006507 3.4e-43 178.7 195 60.0
BolC7t44234H Brassica oleracea HOM05D005583 ORTHO05D006507 3.4e-43 178.7 195 60.0
Sp2g17030 Schrenkiella parvula HOM05D005583 ORTHO05D006507 1.1e-36 157.1 195 53.8
Thhalv10003517m.g Eutrema salsugineum HOM05D005583 ORTHO05D006507 1.4e-36 156.8 195 53.3
BcaC06g30938 Brassica carinata HOM05D005583 ORTHO05D006507 3.7e-34 148.7 196 54.6
Aa31LG2G4780 Aethionema arabicum HOM05D005583 ORTHO05D006507 2.2e-26 122.9 203 44.3
AL5G17540 Arabidopsis lyrata HOM05D005583 ORTHO05D006507 2.5e-22 109.4 184 45.7
AT3G28030 Arabidopsis thaliana HOM05D005583 ORTHO05D006507 7.3e-22 107.8 194 42.8
THA.LOC104825294 Tarenaya hassleriana HOM05D005583 ORTHO05D006507 7.3e-22 107.8 194 45.9
Carub.0005s0655 Capsella rubella HOM05D005583 ORTHO05D006507 6.2e-21 104.8 209 41.6
SalBow1G3935 Salvia bowleyana HOM05D005583 ORTHO05D006507 5.3e-20 101.7 195 43.1
Actinidia36072 Actinidia chinensis HOM05D005583 ORTHO05D006507 9.0e-20 100.9 211 41.7
GSVIVG01032508001 Vitis vinifera HOM05D005583 ORTHO05D006507 1.2e-19 100.5 189 42.9
PGR142G3038 Punica granatum HOM05D005583 ORTHO05D006507 1.5e-19 100.1 197 42.1
Dinv35039 Davidia involucrata HOM05D005583 ORTHO05D006507 2.0e-19 99.8 210 39.5
CSS0006408 Camellia sinensis var. sinensis HOM05D005583 ORTHO05D006507 3.4e-19 99.0 195 41.5
CANSAT64G0115 Cannabis sativa HOM05D005583 ORTHO05D006507 7.6e-19 97.8 200 40.0
CiPaw.04G023600 Carya illinoinensis HOM05D005583 ORTHO05D006507 1.3e-18 97.1 197 39.1
MD17G1038000 Malus domestica HOM05D005583 ORTHO05D006507 3.8e-18 95.5 197 40.1
Nn4g22860 Nelumbo nucifera HOM05D005583 ORTHO05D006507 6.4e-18 94.7 184 42.4
FAN05G0201 Fragaria x ananassa HOM05D005583 ORTHO05D006507 1.1e-17 94.0 184 43.5
Hma1.2p1_0697F.1_g204850 Hydrangea macrophylla HOM05D005583 ORTHO05D006507 1.1e-17 94.0 204 39.7
Nitab4.5_0001727g0030 Nicotiana tabacum HOM05D005583 ORTHO05D006507 1.1e-17 94.0 195 39.0
MSTRG.3182 Avicennia marina HOM05D005583 ORTHO05D006507 1.4e-17 93.6 184 41.3
Lsat_1_v5_gn_2_92580 Lactuca sativa HOM05D005583 ORTHO05D006507 1.4e-17 93.6 203 39.9
FvH4_6g50430 Fragaria vesca HOM05D005583 ORTHO05D006507 2.4e-17 92.8 184 43.5
Lj1g0019005 Lotus japonicus HOM05D005583 ORTHO05D006507 2.4e-17 92.8 188 42.6
FAN09G0355 Fragaria x ananassa HOM05D005583 ORTHO05D006507 3.2e-17 92.4 184 44.6
FAN14G4719 Fragaria x ananassa HOM05D005583 ORTHO05D006507 3.2e-17 92.4 184 42.9
Migut.H00145 Erythranthe guttata HOM05D005583 ORTHO05D006507 4.2e-17 92.0 207 38.2
QL02p077165 Quercus lobata HOM05D005583 ORTHO05D006507 4.2e-17 92.0 184 40.8
PGSC0003DMG400006911 Solanum tuberosum HOM05D005583 ORTHO05D006507 5.4e-17 91.7 195 39.0
arahy.Tifrunner.gnm1.ann1.8IP107 Arachis hypogaea HOM05D005583 ORTHO05D006507 9.3e-17 90.9 189 41.3
unitig_21.g20499 Utricularia gibba HOM05D005583 ORTHO05D006507 9.3e-17 90.9 190 42.1
Sc06g0001630 Simmondsia chinensis HOM05D005583 ORTHO05D006507 1.2e-16 90.5 206 36.9
Cc07_g02460 Coffea canephora HOM05D005583 ORTHO05D006507 2.1e-16 89.7 210 36.2
Manes.15G181100 Manihot esculenta HOM05D005583 ORTHO05D006507 2.1e-16 89.7 184 39.1
Nitab4.5_0001709g0090 Nicotiana tabacum HOM05D005583 ORTHO05D006507 2.1e-16 89.7 195 38.5
Potri.017G070500 Populus trichocarpa HOM05D005583 ORTHO05D006507 2.1e-16 89.7 184 41.3
TWI56G1339 Tripterygium wilfordii HOM05D005583 ORTHO05D006507 2.1e-16 89.7 196 39.8
arahy.Tifrunner.gnm1.ann1.YT8U7M Arachis hypogaea HOM05D005583 ORTHO05D006507 2.7e-16 89.4 189 40.7
Gohir.D07G225712 Gossypium hirsutum HOM05D005583 ORTHO05D006507 2.7e-16 89.4 147 44.9
Sopen02g016780 Solanum pennellii HOM05D005583 ORTHO05D006507 2.7e-16 89.4 195 38.5
Lj7A589G58 Lonicera japonica HOM05D005583 ORTHO05D006507 3.5e-16 89.0 140 48.6
Prupe.3G281300 Prunus persica HOM05D005583 ORTHO05D006507 3.5e-16 89.0 201 38.8
Medtr7g034405 Medicago truncatula HOM05D005583 ORTHO05D006507 4.6e-16 88.6 218 36.2
Sabra17G0050500 Salix brachista HOM05D005583 ORTHO05D006507 4.6e-16 88.6 184 41.3
CsaV3_3G042180 Cucumis sativus L. HOM05D005583 ORTHO05D006507 7.9e-16 87.8 200 38.0
Gorai.001G260400 Gossypium raimondii HOM05D005583 ORTHO05D006507 7.9e-16 87.8 147 44.9
Ciclev10014025m.g Citrus clementina HOM05D005583 ORTHO05D006507 1.0e-15 87.4 184 41.3
MELO3C009939.2 Cucumis melo HOM05D005583 ORTHO05D006507 1.0e-15 87.4 206 37.4
Thecc.04G006200 Theobroma cacao HOM05D005583 ORTHO05D006507 1.0e-15 87.4 153 44.4
AUR62035939 Chenopodium quinoa HOM05D005583 ORTHO05D006507 1.3e-15 87.0 191 38.7
Hund12473 Selenicereus undatus HOM05D005583 ORTHO05D006507 1.3e-15 87.0 184 40.8
ECA238G4583 Erigeron canadensis HOM05D005583 ORTHO05D006507 1.7e-15 86.7 203 37.4
HanXRQChr14g0450181 Helianthus annuus HOM05D005583 ORTHO05D006507 1.7e-15 86.7 199 40.2
RcHm_v2.0_Chr2g0170851 Rosa chinensis HOM05D005583 ORTHO05D006507 1.7e-15 86.7 187 41.7
Solyc02g067670.4 Solanum lycopersicum HOM05D005583 ORTHO05D006507 1.7e-15 86.7 195 37.9
vmacro05807 Vaccinium macrocarpon HOM05D005583 ORTHO05D006507 1.7e-15 86.7 222 36.5
PSO063G3250 Papaver somniferum HOM05D005583 ORTHO05D006507 2.3e-15 86.3 195 40.0
PSO832G0708 Papaver somniferum HOM05D005583 ORTHO05D006507 3.0e-15 85.9 195 40.0
Ah.10g033560 Amaranthus hybridus HOM05D005583 ORTHO05D006507 3.9e-15 85.5 197 38.6
Cfa007452 Carpinus fangiana HOM05D005583 ORTHO05D006507 3.9e-15 85.5 184 39.1
TPR.G30816 Trifolium pratense HOM05D005583 ORTHO05D006507 3.9e-15 85.5 205 39.5
Atru.chr6.2177 Acer truncatum HOM05D005583 ORTHO05D006507 5.1e-15 85.1 184 38.6
Ca_14482_v3 Cicer arietinum L. HOM05D005583 ORTHO05D006507 5.1e-15 85.1 205 37.6
Duzib147G0322 Durio zibethinus HOM05D005583 ORTHO05D006507 5.1e-15 85.1 145 45.5
COL.COLO4_04368 Corchorus olitorius HOM05D005583 ORTHO05D006507 6.6e-15 84.7 214 37.4
Lalb_Chr10g0093441 Lupinus albus HOM05D005583 ORTHO05D006507 8.7e-15 84.3 200 36.5
Phvul.008G152600 Phaseolus vulgaris HOM05D005583 ORTHO05D006507 8.7e-15 84.3 189 39.2
Aqoxy3G03052 Aquilegia oxysepala HOM05D005583 ORTHO05D006507 1.1e-14 84.0 144 43.8
Haze_14650 Corylus avellana HOM05D005583 ORTHO05D006507 1.5e-14 83.6 184 39.7
VMungo1383G3393 Vigna mungo HOM05D005583 ORTHO05D006507 1.5e-14 83.6 188 38.3
EL10Ac1g00599 Beta vulgaris HOM05D005583 ORTHO05D006507 1.9e-14 83.2 194 38.1
Os03g0205400 Oryza sativa ssp. japonica HOM05D005583 ORTHO05D006507 3.3e-14 82.4 213 34.3
BcaC01g05741 Brassica carinata HOM05D001368 ORTHO05D024310 4.3e-14 82.0 44 97.7
HPP92_006939 Vanilla planifolia HOM05D005583 ORTHO05D006507 3.6e-13 79.0 185 36.8
DCAR_011222 Daucus carota HOM05D005583 ORTHO05D006507 3.1e-12 75.9 184 36.4
ATR0629G036 Amborella trichopoda HOM05D005583 ORTHO05D006507 5.3e-12 75.1 205 35.1
CDE10G1103 Ceratophyllum demersum HOM05D005583 ORTHO05D006507 2.0e-11 73.2 159 39.0
ClCG10G014410 Citrullus lanatus HOM05D005583 ORTHO05D006507 7.6e-11 71.2 197 36.0
Rhsim10G0025300 Rhododendron simsii HOM05D005583 ORTHO05D006507 7.6e-11 71.2 175 38.3
Psat3g171800 Pisum sativum HOM05D005583 ORTHO05D006507 3.8e-10 68.9 114 45.6
SEGI_00379 Sequoiadendron giganteum HOM05D005583 ORTHO05D006507 1.4e-09 67.0 116 42.2
SEGI_35695 Sequoiadendron giganteum HOM05D005583 ORTHO05D006507 1.4e-09 67.0 116 42.2
Pp3c11_24040 Physcomitrium patens HOM05D005583 ORTHO05D006507 3.2e-09 65.9 123 40.7
Mapoly0177s0011 Marchantia polymorpha HOM05D005583 ORTHO05D006507 1.0e-07 60.8 128 35.2
CBR_g74695 Chara braunii HOM05D005583 ORTHO05D006507 1.3e-07 60.5 188 31.4
SMO367G0233 Selaginella moellendorffii HOM05D005583 ORTHO05D006507 1.8e-07 60.1 117 40.2
CSS0039879 Camellia sinensis var. sinensis HOM05D005583 ORTHO05D006507 1.1e-06 57.4 124 37.9
Cre10.g429050 Chlamydomonas reinhardtii HOM05D005583 ORTHO05D006507 5.6e-06 55.1 122 34.4


User provided reference genes

Program Settings