Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
ZM09G21880
(Zea mays)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Zea mays | Orthologous gene family | ZM09G21880 | 1 |  |
| Anchor point | ZM07G30430 ZM01G13970 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | ZM09G21880 | 1 | ||
| Tree-based ortholog | ZM01G13970 ZM09G21880 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G20770 | 1 | |
| Tree-based ortholog | many-to-many | AT5G10120 AT5G65100 | 2 | ||
| Brachypodium distachyon | Anchor point | many-to-1 | BD1G63780 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD1G63780 | 1 | ||
| Tree-based ortholog | many-to-1 | BD1G63780 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00103G00550 | 1 | |
| Tree-based ortholog | many-to-1 | CP00020G02350 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV1568516G00010 | 1 | |
| Tree-based ortholog | many-to-1 | HV1568516G00010 | 1 | ||
| Musa acuminata | Orthologous gene family | 1-to-1 | MA03G09580 | 1 | |
| Anchor point | many-to-many | MA05G28360 MA09G17520 MA10G13090 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA02G11740 MA06G16320 MA08G22080 ... | 8 | ||
| Tree-based ortholog | many-to-many | MA06G16320 MA10G13090 MA03G09580 ... | 9 | ||
| Oryza sativa ssp. indica | Anchor point | many-to-many | OSINDICA_03G19810 OSINDICA_07G40580 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_03G19810 | 1 | ||
| Tree-based ortholog | many-to-1 | OSINDICA_03G19810 | 1 | ||
| Oryza sativa ssp. japonica | Anchor point | many-to-many | OS03G20780 OS07G48630 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G20790 | 1 | ||
| Tree-based ortholog | many-to-many | OS03G20790 OS03G20780 | 2 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00087G00140 PP00011G01520 | 2 | |
| Tree-based ortholog | many-to-many | PP00011G01520 PP00087G00140 | 2 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT08G01130 PT10G24750 | 2 | |
| Tree-based ortholog | many-to-many | PT10G24750 PT08G01130 PT09G15920 ... | 4 | ||
| Setaria italica | Anchor point | many-to-many | SI002G44660 SI009G43240 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI009G43240 | 1 | ||
| Tree-based ortholog | many-to-1 | SI009G43240 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G096810 | 1 | |
| Tree-based ortholog | many-to-many | SL00G154980 SL04G054840 SL03G096630 | 3 | ||
| Sorghum bicolor | Anchor point | many-to-many | SB02G043350 SB01G036740 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB01G036740 | 1 | ||
| Tree-based ortholog | many-to-1 | SB01G036740 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV06G06520 | 1 | |
| Tree-based ortholog | many-to-1 | VV06G12160 | 1 |