Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
SL01G011030
(Solanum lycopersicum)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Solanum lycopersicum | Tree-based ortholog | SL05G012560 SL01G011030 | 2 |  |
| Orthologous gene family | SL01G011030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | SL01G011030 SL05G012560 SL02G088570 | 3 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Tree-based ortholog | many-to-1 | AT1G69330 | 1 | |
| Anchor point | N/A | AT1G69330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT1G69330 | 1 | ||
| Brachypodium distachyon | Tree-based ortholog | many-to-many | BD1G70360 BD1G16170 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G70360 | 1 | ||
| Carica papaya | Tree-based ortholog | many-to-1 | CP00001G00960 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00014G01430 | 1 | ||
| Hordeum vulgare | Tree-based ortholog | many-to-1 | HV135065G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV135065G00010 | 1 | ||
| Musa acuminata | Tree-based ortholog | many-to-many | MA04G33600 MA05G01660 MA10G11940 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA01G25520 MA04G14750 | 2 | ||
| Oryza sativa ssp. indica | Tree-based ortholog | many-to-many | OSINDICA_03G09770 OSINDICA_03G29660 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_03G29660 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | many-to-many | OS03G11260 OS03G31320 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G31320 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | many-to-many | PP00104G00590 PP00078G01050 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00104G00590 PP00078G01050 | 2 | ||
| Populus trichocarpa | Tree-based ortholog | many-to-1 | PT10G16110 | 1 | |
| Anchor point | N/A | PT10G16110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT04G12540 PT17G09000 | 2 | ||
| Setaria italica | Tree-based ortholog | many-to-many | SI009G51050 SI009G37220 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI009G37220 | 1 | ||
| Sorghum bicolor | Tree-based ortholog | many-to-many | SB01G043230 SB01G032180 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB01G043230 | 1 | ||
| Vitis vinifera | Tree-based ortholog | many-to-1 | VV14G02800 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV14G02800 | 1 | ||
| Zea mays | Tree-based ortholog | many-to-many | ZM09G26190 ZM01G18490 ZM09G19720 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM09G26190 | 1 |