Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
SI009G42380
(Setaria italica)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Setaria italica | Orthologous gene family | SI009G42380 | 1 |  |
| Anchor point | SI003G20910 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | SI009G42380 | 1 | ||
| Tree-based ortholog | SI009G42380 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Anchor point | 1-to-1 | AT2G38400 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G08860 | 1 | ||
| Tree-based ortholog | 1-to-1 | AT2G38400 | 1 | ||
| Brachypodium distachyon | Anchor point | 1-to-many | BD1G63030 BD2G22410 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD1G63030 | 1 | ||
| Tree-based ortholog | 1-to-1 | BD1G63030 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00033G00890 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00033G00890 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR03G09160 | 1 | |
| Tree-based ortholog | 1-to-many | CR03G09160 CR11G03370 CR06G07220 ... | 5 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV41458G00020 | 1 | |
| Tree-based ortholog | 1-to-1 | HV41458G00020 | 1 | ||
| Musa acuminata | Anchor point | 1-to-1 | MA06G33450 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA05G08770 MA06G33450 | 2 | ||
| Tree-based ortholog | 1-to-1 | MA06G33450 | 1 | ||
| Oryza sativa ssp. indica | Anchor point | 1-to-many | OSINDICA_05G35600 OSINDICA_03G21080 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_03G21080 | 1 | ||
| Tree-based ortholog | 1-to-1 | OSINDICA_03G21080 | 1 | ||
| Oryza sativa ssp. japonica | Anchor point | 1-to-many | OS03G21960 OS05G39770 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G21960 | 1 | ||
| Tree-based ortholog | 1-to-1 | OS03G21960 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL20G03280 | 1 | |
| Tree-based ortholog | 1-to-many | OL20G03280 OL10G02150 | 2 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00032G00900 | 1 | |
| Tree-based ortholog | 1-to-many | PP00032G00900 PP09495G00010 PP00126G00460 ... | 6 | ||
| Populus trichocarpa | Anchor point | 1-to-1 | PT06G10680 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT06G10680 PT16G13220 | 2 | ||
| Tree-based ortholog | 1-to-many | PT16G13220 PT06G10680 | 2 | ||
| Solanum lycopersicum | Anchor point | 1-to-1 | SL10G076250 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G076250 | 1 | ||
| Tree-based ortholog | 1-to-1 | SL10G076250 | 1 | ||
| Sorghum bicolor | Anchor point | 1-to-many | SB09G023310 SB01G035960 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB01G035960 | 1 | ||
| Tree-based ortholog | 1-to-1 | SB01G035960 | 1 | ||
| Vitis vinifera | Anchor point | 1-to-many | VV06G00800 VV08G06170 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G06170 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV08G06170 | 1 | ||
| Zea mays | Anchor point | 1-to-1 | ZM01G14830 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM06G26480 ZM06G26540 | 2 | ||
| Tree-based ortholog | 1-to-many | ZM01G14830 ZM06G26480 ZM06G26540 | 3 |