Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
SI002G28670
(Setaria italica)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Setaria italica | Orthologous gene family | SI002G28670 SI002G28680 | 2 |  |
| Anchor point | SI007G21080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | SI002G28670 SI002G28680 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Anchor point | 1-to-many | AT5G51990 AT1G12610 AT1G63030 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT4G25470 AT4G25490 AT4G25480 ... | 4 | ||
| Brachypodium distachyon | Anchor point | 1-to-many | BD3G31600 BD5G18850 BD4G35570 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD4G35650 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00074G00830 | 1 | |
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR16G05640 | 1 | |
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV47850G00010 | 1 | |
| Musa acuminata | Anchor point | 1-to-many | MA11G03260 MA03G12620 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA07G06080 MA04G20200 | 2 | ||
| Oryza sativa ssp. indica | Anchor point | 1-to-many | OSINDICA_04G40530 OSINDICA_09G27820 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_09G27820 | 1 | ||
| Oryza sativa ssp. japonica | Anchor point | 1-to-many | OS08G43210 OS09G35010 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS09G35030 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00015G01270 PP00181G00300 PP00014G02470 ... | 6 | |
| Populus trichocarpa | Anchor point | 1-to-many | PT01G11070 PT03G12120 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT12G13410 PT15G13640 | 2 | ||
| Solanum lycopersicum | Anchor point | 1-to-many | SL03G026270 SL08G007820 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL03G124110 SL03G026270 SL03G026280 | 3 | ||
| Sorghum bicolor | Orthologous gene family | many-to-1 | SB02G030320 | 1 | |
| Anchor point | 1-to-many | SB07G025210 SB02G030310 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB02G030320 | 1 | ||
| Vitis vinifera | Anchor point | 1-to-many | VV02G07270 VV16G00730 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV02G07270 | 1 | ||
| Zea mays | Anchor point | 1-to-many | ZM01G34610 ZM02G33880 ZM07G19730 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM07G19720 | 1 |