Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
SB02G004590
(Sorghum bicolor)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Sorghum bicolor | Orthologous gene family | SB02G004590 | 1 |  |
| Anchor point | SB01G005170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | SB02G004610 SB02G004590 | 2 | ||
| Tree-based ortholog | SB02G004610 SB02G004590 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G24800 | 1 | |
| Tree-based ortholog | many-to-many | AT3G54620 AT4G02640 | 2 | ||
| Brachypodium distachyon | Anchor point | 1-to-many | BD1G55450 BD1G05480 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G05480 | 1 | ||
| Tree-based ortholog | many-to-1 | BD1G55450 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00052G00950 | 1 | |
| Tree-based ortholog | many-to-1 | CP00052G00950 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | many-to-1 | CR10G04610 | 1 | |
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV56179G00020 | 1 | |
| Tree-based ortholog | many-to-1 | HV1558164G00010 | 1 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA02G12830 MA04G29380 | 2 | |
| Tree-based ortholog | many-to-many | MA07G07850 MA10G08830 | 2 | ||
| Oryza sativa ssp. indica | Anchor point | 1-to-many | OSINDICA_07G06730 OSINDICA_03G55620 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_03G55620 | 1 | ||
| Tree-based ortholog | many-to-1 | OSINDICA_07G06730 | 1 | ||
| Oryza sativa ssp. japonica | Anchor point | 1-to-many | OS03G58250 OS07G08420 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G58250 | 1 | ||
| Tree-based ortholog | many-to-1 | OS07G08420 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00206G00570 PP00206G00560 PP00220G00520 ... | 6 | |
| Tree-based ortholog | many-to-many | PP00206G00570 PP00220G00510 PP00189G00560 ... | 4 | ||
| Populus trichocarpa | Anchor point | 1-to-many | PT02G04580 PT05G21750 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT13G04070 PT05G05320 | 2 | ||
| Tree-based ortholog | many-to-many | PT13G04070 PT05G05320 | 2 | ||
| Setaria italica | Anchor point | 1-to-many | SI002G05600 SI009G05280 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI002G05600 | 1 | ||
| Tree-based ortholog | many-to-1 | SI002G05600 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G097330 | 1 | |
| Tree-based ortholog | many-to-many | SL01G097330 SL08G022080 | 2 | ||
| Vitis vinifera | Anchor point | 1-to-1 | VV07G01470 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV07G01470 | 1 | ||
| Tree-based ortholog | many-to-many | VV07G01470 VV14G03090 | 2 | ||
| Zea mays | Anchor point | 1-to-many | ZM01G56130 ZM07G03200 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM07G03200 | 1 | ||
| Tree-based ortholog | many-to-1 | ZM07G03200 | 1 |