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Integrative Orthology Viewer:
PTCG00320
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PTCG00320 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | PTCG00320 | 1 | ||
| Tree-based ortholog | PT09G01640 PTCG00320 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Anchor point | N/A | ATCG00300 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATCG00300 | 1 | ||
| Tree-based ortholog | many-to-1 | ATCG00300 | 1 | ||
| Brachypodium distachyon | Anchor point | N/A | BDCG00130 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BDCG00130 | 1 | ||
| Tree-based ortholog | many-to-1 | BDCG00130 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CPCG00310 | 1 | |
| Anchor point | N/A | CPCG00310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CPCG00310 | 1 | ||
| Tree-based ortholog | many-to-1 | CPCG00310 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | 1-to-1 | CRCG00440 | 1 | |
| Anchor point | N/A | CRCG00440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRCG00440 | 1 | ||
| Tree-based ortholog | many-to-1 | CRCG00440 | 1 | ||
| Hordeum vulgare | Orthologous gene family | 1-to-1 | HVCG00120 | 1 | |
| Anchor point | N/A | HVCG00120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HVCG00120 | 1 | ||
| Tree-based ortholog | many-to-many | HVCG00120 HV2429370G00010 | 2 | ||
| Musa acuminata | Orthologous gene family | 1-to-1 | MACG00290 | 1 | |
| Anchor point | N/A | MACG00290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MACG00290 | 1 | ||
| Tree-based ortholog | many-to-1 | MACG00290 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-many | OS02G24628 OS04G16876 | 2 | |
| Anchor point | N/A | OS04G16876 OS02G24628 OSCG00130 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS10G21214 OS02G24628 OSCG00130 ... | 5 | ||
| Tree-based ortholog | many-to-many | OS04G16876 OSCG00130 OS01G58038 ... | 5 | ||
| Physcomitrella patens | Anchor point | N/A | PPCG00550 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP02168G00010 PPCG00550 | 2 | ||
| Tree-based ortholog | many-to-many | PP02168G00010 PPCG00550 | 2 | ||
| Setaria italica | Orthologous gene family | 1-to-1 | SICG00140 | 1 | |
| Anchor point | N/A | SICG00140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SICG00140 | 1 | ||
| Tree-based ortholog | many-to-many | SICG00140 SI009G04730 | 2 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-many | SL01G102770 SLCG00300 | 2 | |
| Anchor point | N/A | SLCG00300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | SL11G050770 SL01G102770 SLCG00300 | 3 | ||
| Tree-based ortholog | many-to-many | SLCG00300 SL01G102770 SL10G017950 ... | 4 | ||
| Sorghum bicolor | Orthologous gene family | 1-to-1 | SB03G020220 | 1 | |
| Anchor point | N/A | SBCG00160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | SBCG00160 SB03G020220 | 2 | ||
| Tree-based ortholog | many-to-many | SB03G020220 SBCG00160 SB01G029194 | 3 | ||
| Vitis vinifera | Anchor point | N/A | VVCG00320 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VVCG00320 | 1 | ||
| Tree-based ortholog | many-to-1 | VVCG00320 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM05G41480 | 1 | |
| Anchor point | N/A | ZM05G41480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM05G41680 ZM05G41480 | 2 | ||
| Tree-based ortholog | many-to-many | ZM05G41680 ZM05G41480 ZM05G22500 | 3 |