Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT18G07140
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT18G07140 | 1 |  |
| Anchor point | PT06G15460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT06G15460 PT18G07140 | 2 | ||
| Tree-based ortholog | PT18G07140 PT18G07330 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G26650 | 1 | |
| Tree-based ortholog | many-to-1 | AT2G26650 | 1 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD2G45170 | 1 | |
| Tree-based ortholog | many-to-many | BD1G55790 BD2G45170 | 2 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00334G00010 | 1 | |
| Tree-based ortholog | many-to-1 | CP00334G00010 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-many | CR01G02970 CR01G02990 CR01G02980 ... | 4 | |
| Tree-based ortholog | many-to-many | CR01G02990 CR01G03010 CR01G02970 ... | 4 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV66703G00010 | 1 | |
| Tree-based ortholog | many-to-1 | HV66703G00010 | 1 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA00G07280 MA03G21250 MA04G09220 ... | 4 | |
| Tree-based ortholog | many-to-many | MA00G07280 MA05G10060 MA04G09230 ... | 5 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_01G43570 | 1 | |
| Tree-based ortholog | many-to-many | OSINDICA_07G06170 OSINDICA_01G43570 | 2 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G45990 | 1 | |
| Tree-based ortholog | many-to-many | OS07G07910 OS01G45990 | 2 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL13G00440 | 1 | |
| Tree-based ortholog | many-to-many | OL13G00590 OL11G00850 OL05G01450 ... | 4 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00283G00400 PP00003G00460 PP00022G00950 ... | 4 | |
| Tree-based ortholog | many-to-many | PP00022G00950 PP00283G00400 PP00002G00840 ... | 4 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI005G25120 | 1 | |
| Tree-based ortholog | many-to-many | SI002G04730 SI005G25120 | 2 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL12G006850 | 1 | |
| Tree-based ortholog | many-to-1 | SL12G006850 | 1 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB03G029520 | 1 | |
| Tree-based ortholog | many-to-many | SB02G004160 SB03G029520 | 2 | ||
| Vitis vinifera | Anchor point | 1-to-1 | VV11G05970 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV11G05970 | 1 | ||
| Tree-based ortholog | many-to-1 | VV11G05970 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM08G24700 | 1 | |
| Tree-based ortholog | many-to-many | ZM07G02770 ZM08G24700 ZM03G36310 | 3 |