Integrative Orthology Viewer: PT16G12350 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT00G04700 PT00G04720 PT00G04770 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | PT06G10320 PT16G12330 PT00G16490 ... | 4 | ||
Tree-based ortholog | PT16G12350 PT00G16490 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G70110 AT2G37710 AT2G43690 ... | 18 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT2G37710 AT4G02410 AT4G02420 ... | 4 | ||
Tree-based ortholog | many-to-many | AT3G08870 AT5G01550 | 2 | ||
Brachypodium distachyon | Orthologous gene family | many-to-many | BD1G23697 BD1G23710 BD1G23730 ... | 11 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G07237 | 1 | ||
Tree-based ortholog | many-to-many | BD1G57780 BD5G16600 BD1G57775 ... | 11 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00001G04260 CP00228G00020 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00120G00360 | 1 | ||
Tree-based ortholog | many-to-many | CP00001G04260 CP00228G00020 | 2 | ||
Hordeum vulgare | Orthologous gene family | many-to-many | HV138141G00010 HV138863G00010 HV1570075G00010 ... | 16 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV2551273G00010 | 1 | ||
Tree-based ortholog | many-to-many | HV1570075G00010 HV138141G00010 HV92670G00010 ... | 16 | ||
Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA10G00480 MA09G03520 | 2 | |
Tree-based ortholog | many-to-many | MA09G10130 MA09G10070 MA09G10170 ... | 7 | ||
Oryza sativa ssp. indica | Orthologous gene family | many-to-many | OSINDICA_02G18430 OSINDICA_02G18500 OSINDICA_04G37040 ... | 18 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_07G02710 | 1 | ||
Tree-based ortholog | many-to-many | OSINDICA_07G02850 OSINDICA_07G31180 OSINDICA_03G13530 ... | 20 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G19530 OS02G42780 OS03G56160 ... | 21 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS02G42780 | 1 | ||
Tree-based ortholog | many-to-many | OS10G38960 OS06G10790 | 2 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00013G00260 PP00293G00340 PP00116G00920 ... | 6 | |
Tree-based ortholog | many-to-many | PP00061G00240 PP00293G00340 PP00056G00280 ... | 6 | ||
Setaria italica | Orthologous gene family | many-to-many | SI001G13940 SI001G17620 SI001G26090 ... | 15 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI002G02590 | 1 | ||
Tree-based ortholog | many-to-1 | SI002G35020 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL09G011060 SL09G011070 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL09G005000 | 1 | ||
Tree-based ortholog | many-to-many | SL09G011060 SL09G011070 | 2 | ||
Sorghum bicolor | Orthologous gene family | many-to-many | SB01G003020 SB01G006780 SB01G020960 ... | 15 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB10G011150 | 1 | ||
Tree-based ortholog | many-to-many | SB08G000750 SB02G002210 SB06G023510 ... | 15 | ||
Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV08G06750 | 1 | |
Tree-based ortholog | many-to-many | VV13G10070 VV08G06740 | 2 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G10190 ZM01G27190 ZM01G43690 ... | 14 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM07G25180 | 1 | ||
Tree-based ortholog | many-to-many | ZM06G14160 ZM02G46220 ZM01G10190 ... | 14 |