Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT13G12350
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT13G12350 | 1 |  |
| Anchor point | PT19G09260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT19G09260 PT13G12350 | 2 | ||
| Tree-based ortholog | PT13G12350 PT19G09260 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT1G06310 AT1G06290 | 2 | |
| Tree-based ortholog | many-to-1 | AT3G06690 | 1 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD3G22660 | 1 | |
| Tree-based ortholog | many-to-1 | BD3G22660 | 1 | ||
| Carica papaya | Anchor point | 1-to-1 | CP00050G00020 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00050G00020 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00050G00020 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR16G07720 | 1 | |
| Tree-based ortholog | many-to-many | CR11G02690 CR05G00610 | 2 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV1570196G00010 | 1 | |
| Tree-based ortholog | many-to-1 | HV1570196G00010 | 1 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA06G06010 MA02G15550 | 2 | |
| Tree-based ortholog | many-to-many | MA02G15550 MA06G06010 | 2 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_06G22560 | 1 | |
| Tree-based ortholog | many-to-1 | OSINDICA_06G22560 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS06G24704 | 1 | |
| Tree-based ortholog | many-to-1 | OS06G24704 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL01G02670 | 1 | |
| Tree-based ortholog | many-to-1 | OL12G02360 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00149G00320 PP00037G00700 | 2 | |
| Tree-based ortholog | many-to-many | PP00037G00700 PP00149G00320 | 2 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI004G15410 | 1 | |
| Tree-based ortholog | many-to-1 | SI004G15410 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL10G008110 | 1 | |
| Tree-based ortholog | many-to-1 | SL10G008110 | 1 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB03G039670 | 1 | |
| Tree-based ortholog | many-to-1 | SB03G039670 | 1 | ||
| Vitis vinifera | Anchor point | 1-to-1 | VV12G02370 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV12G02370 | 1 | ||
| Tree-based ortholog | many-to-many | VV13G03560 VV16G03770 VV16G03780 ... | 6 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM03G27060 | 1 | |
| Tree-based ortholog | many-to-1 | ZM03G27060 | 1 |