Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT13G01990
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT13G01990 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | PT13G01990 PT01G12110 PT01G12100 | 3 | ||
| Tree-based ortholog | PT03G11210 PT01G12100 PT13G01990 | 3 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT1G62620 AT1G63370 AT1G62600 | 3 | |
| Tree-based ortholog | many-to-many | AT1G63370 AT1G62620 AT1G62600 | 3 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD3G32990 | 1 | |
| Tree-based ortholog | many-to-many | BD1G78290 BD3G05860 BD3G05867 ... | 4 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00029G01310 | 1 | |
| Tree-based ortholog | many-to-1 | CP00029G01310 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR03G05720 | 1 | |
| Tree-based ortholog | many-to-1 | CR03G05720 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV139814G00010 | 1 | |
| Tree-based ortholog | many-to-many | HV68056G00010 HV139814G00010 | 2 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA11G18140 | 1 | |
| Tree-based ortholog | many-to-many | MA11G18140 MA02G18930 | 2 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_07G01080 | 1 | |
| Tree-based ortholog | many-to-1 | OSINDICA_10G30850 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS10G40570 | 1 | |
| Tree-based ortholog | many-to-1 | OS10G40570 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL12G01930 | 1 | |
| Tree-based ortholog | many-to-many | OL17G01200 OL12G01930 | 2 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00011G01220 | 1 | |
| Tree-based ortholog | many-to-1 | PP00011G01220 | 1 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI009G33840 | 1 | |
| Tree-based ortholog | many-to-many | SI005G03710 SI009G33840 | 2 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL06G060610 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL06G060610 | 1 | ||
| Tree-based ortholog | many-to-many | SL06G062320 SL06G060610 SL06G062310 | 3 | ||
| Sorghum bicolor | Orthologous gene family | 1-to-1 | SB01G029510 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB01G029510 | 1 | ||
| Tree-based ortholog | many-to-many | SB01G050390 SB01G029510 SB01G029560 | 3 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV02G00160 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV00G10910 VV02G00170 VV02G00160 ... | 4 | ||
| Tree-based ortholog | many-to-many | VV00G10910 VV00G10880 VV02G00180 ... | 8 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G21440 | 1 | |
| Tree-based ortholog | many-to-1 | ZM01G20970 | 1 |