Integrative Orthology Viewer: PT10G20940 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT10G20940 | 1 | |
Anchor point | PT01G23580 PT09G02770 PT08G05120 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | PT08G05120 PT10G20940 | 2 | ||
Tree-based ortholog | PT08G05120 PT10G20940 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | many-to-1 | AT5G59820 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT3G53600 AT2G37430 | 2 | ||
Tree-based ortholog | many-to-many | AT3G46080 AT3G46070 AT3G46090 ... | 5 | ||
Brachypodium distachyon | Anchor point | many-to-many | BD1G66330 BD2G54470 BD2G23160 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G66330 | 1 | ||
Tree-based ortholog | many-to-many | BD2G23160 BD2G54500 BD1G03790 ... | 7 | ||
Carica papaya | Anchor point | many-to-1 | CP00190G00290 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP30912G00010 | 1 | ||
Tree-based ortholog | many-to-many | CP30912G00010 CP00163G00280 CP00190G00290 | 3 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-many | HV2551997G00020 HV2551997G00010 | 2 | |
Tree-based ortholog | many-to-many | HV2633607G00010 HV47216G00010 HV152849G00010 ... | 6 | ||
Musa acuminata | Anchor point | many-to-many | MA10G03760 MA10G13850 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA05G29960 MA09G03320 MA10G03760 ... | 4 | ||
Tree-based ortholog | many-to-many | MA11G24660 MA10G13850 MA05G29330 ... | 7 | ||
Oryza sativa ssp. indica | Anchor point | many-to-many | OSINDICA_03G15620 OSINDICA_01G58830 OSINDICA_05G01320 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_03G15620 | 1 | ||
Tree-based ortholog | many-to-many | OSINDICA_01G58880 OSINDICA_11G33990 OSINDICA_11G33930 ... | 8 | ||
Oryza sativa ssp. japonica | Anchor point | many-to-many | OS03G17150 OS05G02390 OS01G62130 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G17150 | 1 | ||
Tree-based ortholog | many-to-many | OS05G38600 OS01G62190 OS11G47620 ... | 8 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00033G00150 PP00254G00140 | 2 | |
Setaria italica | Anchor point | many-to-many | SI005G38300 SI009G46330 SI003G06290 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI009G46330 | 1 | ||
Tree-based ortholog | many-to-many | SI005G38340 SI009G03320 SI009G03310 ... | 5 | ||
Solanum lycopersicum | Anchor point | many-to-many | SL11G073060 SL06G075780 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL05G054660 SL05G054650 | 2 | ||
Tree-based ortholog | many-to-many | SL05G054650 SL05G054660 | 2 | ||
Sorghum bicolor | Anchor point | many-to-many | SB03G039250 SB01G039190 SB09G001560 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB01G039190 | 1 | ||
Tree-based ortholog | many-to-many | SB03G039270 SB01G003280 SB01G003270 ... | 6 | ||
Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV06G08790 | 1 | |
Tree-based ortholog | many-to-many | VV01G10250 VV06G11410 VV15G00360 ... | 4 | ||
Zea mays | Anchor point | many-to-many | ZM06G04730 ZM01G11620 ZM09G23650 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G11620 | 1 | ||
Tree-based ortholog | many-to-many | ZM08G32190 ZM03G27480 ZM01G57820 ... | 9 |