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Integrative Orthology Viewer:
PT10G20640
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT10G20640 | 1 |  |
| Anchor point | PT08G05410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT10G20640 PT08G05410 | 2 | ||
| Tree-based ortholog | PT10G20640 PT08G05410 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | 1-to-many | AT2G37570 AT3G12570 | 2 | |
| Anchor point | 1-to-many | AT2G37570 AT5G02480 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G12570 | 1 | ||
| Tree-based ortholog | many-to-1 | AT3G12570 | 1 | ||
| Brachypodium distachyon | Anchor point | 1-to-many | BD1G66480 BD2G03340 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD2G03340 | 1 | ||
| Tree-based ortholog | many-to-many | BD2G03340 BD1G66480 BD2G54580 | 3 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00260G00020 | 1 | |
| Anchor point | 1-to-many | CP00190G00020 CP00001G03790 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00001G03790 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00001G03790 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV1559973G00010 | 1 | |
| Tree-based ortholog | many-to-many | HV1559973G00010 HV94227G00010 | 2 | ||
| Musa acuminata | Anchor point | 1-to-many | MA10G02550 MA11G25170 MA02G16630 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA11G25170 MA08G21390 MA10G02550 ... | 5 | ||
| Tree-based ortholog | many-to-many | MA10G02550 MA08G21390 MA07G15590 ... | 8 | ||
| Oryza sativa ssp. indica | Anchor point | 1-to-many | OSINDICA_01G05250 OSINDICA_03G15340 OSINDICA_01G59000 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_01G59000 | 1 | ||
| Tree-based ortholog | many-to-many | OSINDICA_01G05250 OSINDICA_03G15340 OSINDICA_01G59000 | 3 | ||
| Oryza sativa ssp. japonica | Anchor point | 1-to-many | OS01G05790 OS03G16910 OS01G62300 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G05790 | 1 | ||
| Tree-based ortholog | many-to-many | OS01G05790 OS03G16910 OS02G07130 ... | 4 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-many | PP00009G00670 PP00156G00140 PP00403G00300 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00009G00670 PP00403G00300 PP00156G00140 | 3 | ||
| Tree-based ortholog | many-to-many | PP00009G00670 PP00156G00140 PP00403G00300 | 3 | ||
| Setaria italica | Orthologous gene family | 1-to-1 | SI005G38450 | 1 | |
| Anchor point | 1-to-many | SI009G46550 SI005G10410 SI005G38450 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI005G10410 | 1 | ||
| Tree-based ortholog | many-to-many | SI005G10410 SI009G46550 SI005G38450 | 3 | ||
| Solanum lycopersicum | Anchor point | 1-to-many | SL10G086420 SL09G010640 SL11G066090 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL04G011460 | 1 | ||
| Tree-based ortholog | many-to-1 | SL04G011460 | 1 | ||
| Sorghum bicolor | Orthologous gene family | 1-to-1 | SB03G006020 | 1 | |
| Anchor point | 1-to-many | SB03G006020 SB03G039370 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB03G006020 | 1 | ||
| Tree-based ortholog | many-to-many | SB03G006020 SB03G023766 SB03G039370 | 3 | ||
| Vitis vinifera | Anchor point | 1-to-many | VV13G05440 VV08G14740 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV13G05440 | 1 | ||
| Tree-based ortholog | many-to-1 | VV13G05440 | 1 | ||
| Zea mays | Anchor point | 1-to-many | ZM01G11440 ZM09G23750 ZM03G05010 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM08G03610 ZM03G05010 | 2 | ||
| Tree-based ortholog | many-to-many | ZM03G05010 ZM08G03610 ZM09G23750 ... | 5 |