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Integrative Orthology Viewer:
PT08G12490
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT08G12490 PT10G11940 | 2 |  |
| Anchor point | PT10G11930 PT04G09540 PT17G11950 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT10G11940 PT08G12490 | 2 | ||
| Tree-based ortholog | PT08G12490 PT10G11940 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Anchor point | many-to-many | AT3G18220 AT2G01180 AT1G15080 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G02600 | 1 | ||
| Tree-based ortholog | many-to-1 | AT3G18220 | 1 | ||
| Brachypodium distachyon | Anchor point | many-to-many | BD2G17600 BD2G47200 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD3G22020 | 1 | ||
| Tree-based ortholog | many-to-1 | BD2G47200 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00314G00010 | 1 | |
| Anchor point | many-to-many | CP00003G04500 CP00170G00260 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00314G00010 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00314G00010 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR05G00700 | 1 | |
| Tree-based ortholog | many-to-many | CR05G04360 CR05G00700 | 2 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV39831G00010 | 1 | |
| Tree-based ortholog | many-to-1 | HV140631G00010 | 1 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA05G10190 MA06G01340 MA03G01470 ... | 5 | |
| Tree-based ortholog | many-to-1 | MA08G18830 | 1 | ||
| Oryza sativa ssp. indica | Anchor point | many-to-many | OSINDICA_01G47160 OSINDICA_05G41860 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_01G45120 | 1 | ||
| Tree-based ortholog | many-to-many | OSINDICA_09G10270 OSINDICA_08G25010 OSINDICA_08G25020 | 3 | ||
| Oryza sativa ssp. japonica | Anchor point | many-to-many | OS01G49820 OS05G47660 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G04660 | 1 | ||
| Tree-based ortholog | many-to-1 | OS01G04660 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL03G02120 | 1 | |
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00004G00310 PP00032G00290 PP00294G00130 | 3 | |
| Tree-based ortholog | many-to-many | PP00032G00290 PP00294G00130 PP00004G00310 ... | 4 | ||
| Setaria italica | Anchor point | many-to-many | SI005G28740 SI003G16020 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI006G12540 | 1 | ||
| Tree-based ortholog | many-to-1 | SI006G12540 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL05G008810 | 1 | |
| Anchor point | many-to-many | SL02G086370 SL05G008800 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL05G008820 SL05G008810 | 2 | ||
| Tree-based ortholog | many-to-1 | SL05G008810 | 1 | ||
| Sorghum bicolor | Anchor point | many-to-many | SB03G031850 SB09G027540 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB09G027540 | 1 | ||
| Tree-based ortholog | many-to-1 | SB03G006640 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV01G07210 VV01G07230 | 2 | |
| Anchor point | many-to-many | VV01G07230 VV14G07720 VV17G06480 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV01G07210 VV01G07230 | 2 | ||
| Tree-based ortholog | many-to-many | VV01G07230 VV01G07210 | 2 | ||
| Zea mays | Anchor point | many-to-many | ZM06G30290 ZM08G25990 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM07G10970 | 1 | ||
| Tree-based ortholog | many-to-1 | ZM08G25990 | 1 |