Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT06G07290
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | PT06G07290 PT18G13980 | 2 |  |
| Tree-based ortholog | PT18G13990 PT18G13980 PT06G07290 | 3 | ||
| Orthologous gene family | PT06G07290 | 1 | ||
| Anchor point | PT18G13980 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT4G29900 | 1 | |
| Tree-based ortholog | many-to-1 | AT5G53010 | 1 | ||
| Anchor point | 1-to-many | AT5G57110 AT4G29900 | 2 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD5G20890 | 1 | |
| Tree-based ortholog | many-to-many | BD3G40640 BD5G20890 | 2 | ||
| Anchor point | 1-to-1 | BD3G05697 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00115G00620 | 1 | |
| Tree-based ortholog | many-to-1 | CP00197G00200 | 1 | ||
| Anchor point | 1-to-1 | CP00115G00620 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-many | CR16G08980 CR12G04490 CR02G12370 ... | 4 | |
| Tree-based ortholog | many-to-many | CR16G08980 CR02G12370 CR12G04490 ... | 5 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV39377G00010 | 1 | |
| Tree-based ortholog | many-to-many | HV38206G00010 HV6937G00010 HV2549712G00010 ... | 4 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA04G05930 MA00G04660 MA01G24480 | 3 | |
| Tree-based ortholog | many-to-many | MA00G05130 MA04G05930 | 2 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_04G43340 | 1 | |
| Tree-based ortholog | many-to-many | OSINDICA_08G39090 OSINDICA_08G39120 OSINDICA_04G43340 | 3 | ||
| Anchor point | 1-to-1 | OSINDICA_02G07780 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS04G51610 | 1 | |
| Tree-based ortholog | many-to-many | OS08G40530 OS04G51610 | 2 | ||
| Anchor point | 1-to-many | OS02G08010 OS04G51610 | 2 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL09G01960 | 1 | |
| Tree-based ortholog | many-to-1 | OL09G01960 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00092G00060 PP00008G01500 PP00290G00070 | 3 | |
| Tree-based ortholog | many-to-many | PP00092G00060 PP00290G00070 PP00008G01500 | 3 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI007G23480 | 1 | |
| Tree-based ortholog | many-to-many | SI006G21350 SI007G23480 | 2 | ||
| Anchor point | 1-to-many | SI001G07040 SI007G23480 | 2 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL07G008320 | 1 | |
| Tree-based ortholog | many-to-many | SL07G008320 SL03G123890 | 2 | ||
| Anchor point | 1-to-1 | SL07G008320 | 1 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB06G027770 | 1 | |
| Tree-based ortholog | many-to-many | SB02G028935 SB07G026810 SB06G027770 | 3 | ||
| Anchor point | 1-to-many | SB06G027770 SB04G005130 | 2 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV11G09580 | 1 | |
| Tree-based ortholog | many-to-many | VV11G09580 VV09G01480 | 2 | ||
| Anchor point | 1-to-1 | VV11G09580 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM10G23500 | 1 | |
| Tree-based ortholog | many-to-many | ZM07G18330 ZM01G33290 ZM10G23500 ... | 4 | ||
| Anchor point | 1-to-many | ZM05G20810 ZM02G05140 | 2 |