Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT05G21980
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT05G21980 | 1 |  |
| Anchor point | PT08G16230 PT02G04310 PT13G04270 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT02G04310 PT05G21980 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Anchor point | many-to-many | AT1G06760 AT2G30620 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT2G30620 AT1G06760 | 2 | ||
| Brachypodium distachyon | Anchor point | many-to-many | BD1G05330 BD1G55260 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G05330 | 1 | ||
| Carica papaya | Anchor point | many-to-1 | CP00052G01390 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP01244G00040 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR06G06060 | 1 | |
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-many | HV66558G00010 HV47718G00010 | 2 | |
| Musa acuminata | Anchor point | many-to-1 | MA05G03350 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA04G23120 MA04G18300 MA08G18870 ... | 4 | ||
| Oryza sativa ssp. indica | Anchor point | many-to-many | OSINDICA_03G55790 OSINDICA_07G06970 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_03G55790 | 1 | ||
| Oryza sativa ssp. japonica | Anchor point | many-to-1 | OS07G08710 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS07G08710 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00033G01410 PP00072G01020 PP00003G01510 ... | 6 | |
| Setaria italica | Anchor point | many-to-1 | SI002G05780 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI002G05780 | 1 | ||
| Solanum lycopersicum | Anchor point | many-to-many | SL09G066100 SL09G083380 SL06G084020 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL06G084020 SL09G066100 | 2 | ||
| Sorghum bicolor | Anchor point | many-to-many | SB01G005010 SB02G004730 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB02G004730 | 1 | ||
| Vitis vinifera | Anchor point | many-to-many | VV14G14890 VV05G06020 VV07G01750 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV07G01750 | 1 | ||
| Zea mays | Anchor point | many-to-1 | ZM01G56300 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM05G02520 ZM05G02510 | 2 |