Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT04G01990
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | PT04G01990 | 1 |  |
| Tree-based ortholog | PT04G01990 | 1 | ||
| Orthologous gene family | PT04G01990 | 1 | ||
| Anchor point | PT01G42020 PT11G13590 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G61800 | 1 | |
| Tree-based ortholog | 1-to-1 | AT1G61800 | 1 | ||
| Anchor point | many-to-1 | AT1G61800 | 1 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD1G26000 | 1 | |
| Tree-based ortholog | 1-to-1 | BD3G15310 | 1 | ||
| Anchor point | many-to-1 | BD1G26000 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00198G00220 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00198G00220 | 1 | ||
| Anchor point | many-to-many | CP00097G00450 CP00198G00220 | 2 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR16G04790 | 1 | |
| Tree-based ortholog | 1-to-many | CR08G05760 CR06G03500 CR01G09880 ... | 4 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV367934G00010 | 1 | |
| Tree-based ortholog | 1-to-1 | HV367934G00010 | 1 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA10G10180 MA08G07560 MA07G03450 | 3 | |
| Tree-based ortholog | 1-to-many | MA08G07560 MA10G10180 MA07G03450 ... | 6 | ||
| Anchor point | many-to-1 | MA09G11990 | 1 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_08G07460 | 1 | |
| Tree-based ortholog | 1-to-1 | OSINDICA_08G07460 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS08G08840 | 1 | |
| Tree-based ortholog | 1-to-1 | OS08G08840 | 1 | ||
| Anchor point | many-to-1 | OS07G33910 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL03G01740 | 1 | |
| Tree-based ortholog | 1-to-many | OL03G00620 OL05G01640 OL14G02550 ... | 4 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00190G00280 PP00070G00720 PP00143G00910 ... | 4 | |
| Tree-based ortholog | 1-to-many | PP00070G00720 PP00190G00280 PP00143G00910 ... | 5 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI006G03900 | 1 | |
| Tree-based ortholog | 1-to-1 | SI006G03900 | 1 | ||
| Anchor point | many-to-1 | SI002G34310 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G031740 | 1 | |
| Tree-based ortholog | 1-to-many | SL07G064270 SL03G031740 SL05G045670 | 3 | ||
| Anchor point | many-to-many | SL07G064270 SL03G031740 | 2 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB07G005200 | 1 | |
| Tree-based ortholog | 1-to-1 | SB07G005200 | 1 | ||
| Anchor point | many-to-1 | SB02G034980 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV10G00450 | 1 | |
| Tree-based ortholog | 1-to-1 | VV10G00450 | 1 | ||
| Anchor point | many-to-many | VV10G00450 VV19G00640 | 2 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM10G07650 | 1 | |
| Tree-based ortholog | 1-to-many | ZM04G06810 ZM10G07650 | 2 | ||
| Anchor point | many-to-many | ZM02G36480 ZM07G23200 | 2 |