Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT01G11900
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT01G11900 | 1 |  |
| Anchor point | PT03G11390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT03G11390 PT01G11900 | 2 | ||
| Tree-based ortholog | PT03G11390 PT01G11900 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Anchor point | 1-to-many | AT1G62790 AT4G12360 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT1G62790 AT1G70250 | 2 | ||
| Tree-based ortholog | many-to-many | AT1G62790 AT5G13900 AT1G73550 ... | 5 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G33200 | 1 | |
| Tree-based ortholog | many-to-1 | BD1G33200 | 1 | ||
| Carica papaya | Anchor point | 1-to-1 | CP00029G01090 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00029G01090 | 1 | ||
| Tree-based ortholog | many-to-many | CP00029G01090 CP00070G00460 | 2 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV1561140G00010 | 1 | |
| Tree-based ortholog | many-to-1 | HV1561140G00010 | 1 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA04G05280 | 1 | |
| Tree-based ortholog | many-to-1 | MA04G05280 | 1 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_06G43290 | 1 | |
| Tree-based ortholog | many-to-many | OSINDICA_11G25430 OSINDICA_06G43290 | 2 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS06G47200 | 1 | |
| Tree-based ortholog | many-to-many | OS11G34660 OS06G47200 | 2 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00051G00670 | 1 | |
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI004G26460 | 1 | |
| Tree-based ortholog | many-to-1 | SI004G26460 | 1 | ||
| Solanum lycopersicum | Anchor point | 1-to-many | SL08G007460 SL08G079250 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL08G007460 SL08G079250 | 2 | ||
| Tree-based ortholog | many-to-many | SL08G007460 SL08G079250 | 2 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB04G024055 | 1 | |
| Tree-based ortholog | many-to-many | SB10G029740 SB04G024055 | 2 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV14G13430 | 1 | |
| Tree-based ortholog | many-to-1 | VV14G13430 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM05G13560 ZM06G11260 | 2 | |
| Tree-based ortholog | many-to-many | ZM06G11260 ZM05G13560 | 2 |