Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT01G09040
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT01G09040 | 1 |  |
| Anchor point | PT03G14120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT01G09040 PT03G14120 | 2 | ||
| Tree-based ortholog | PT03G14120 PT01G09040 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Anchor point | 1-to-many | AT4G23930 AT1G64450 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT4G23930 | 1 | ||
| Tree-based ortholog | many-to-many | AT4G23930 AT1G64450 | 2 | ||
| Brachypodium distachyon | Anchor point | 1-to-1 | BD2G08000 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD2G31590 | 1 | ||
| Tree-based ortholog | many-to-many | BD2G31590 BD2G08000 | 2 | ||
| Carica papaya | Anchor point | 1-to-1 | CP00079G00170 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00079G00170 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00079G00170 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV40656G00020 | 1 | |
| Tree-based ortholog | many-to-1 | HV40656G00020 | 1 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA08G16470 | 1 | |
| Oryza sativa ssp. indica | Anchor point | 1-to-1 | OSINDICA_01G12680 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_05G14750 | 1 | ||
| Tree-based ortholog | many-to-many | OSINDICA_05G14750 OSINDICA_01G12680 | 2 | ||
| Oryza sativa ssp. japonica | Anchor point | 1-to-1 | OS01G13340 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS05G14880 | 1 | ||
| Tree-based ortholog | many-to-many | OS05G14880 OS01G13340 | 2 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00190G00220 | 1 | |
| Setaria italica | Anchor point | 1-to-1 | SI005G00570 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI005G00570 | 1 | ||
| Tree-based ortholog | many-to-1 | SI005G00570 | 1 | ||
| Solanum lycopersicum | Anchor point | 1-to-many | SL01G096000 SL08G082470 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL08G082470 | 1 | ||
| Tree-based ortholog | many-to-1 | SL08G082470 | 1 | ||
| Sorghum bicolor | Anchor point | 1-to-1 | SB03G000650 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB09G008080 | 1 | ||
| Tree-based ortholog | many-to-many | SB09G008080 SB03G000650 | 2 | ||
| Vitis vinifera | Anchor point | 1-to-1 | VV15G06710 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV15G06710 | 1 | ||
| Zea mays | Anchor point | 1-to-1 | ZM03G00430 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM08G16640 | 1 | ||
| Tree-based ortholog | many-to-many | ZM08G16640 ZM03G00430 | 2 |