Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT00G01350
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | PT00G11080 PT00G01390 PT03G08420 ... | 29 |  |
| Tree-based ortholog | PT00G01350 | 1 | ||
| Orthologous gene family | PT00G01110 PT00G01350 PT07G14250 ... | 4 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G36930 | 1 | |
| Tree-based ortholog | 1-to-1 | AT1G27170 | 1 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G24377 | 1 | |
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00004G00820 | 1 | |
| Tree-based ortholog | 1-to-many | CP00004G00900 CP00004G00820 CP00027G00780 ... | 7 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-many | HV41236G00030 HV41236G00020 | 2 | |
| Tree-based ortholog | 1-to-many | HV82152G00010 HV1583049G00010 | 2 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA09G25070 | 1 | |
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_08G41550 | 1 | |
| Tree-based ortholog | 1-to-1 | OSINDICA_07G30340 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS08G42930 | 1 | |
| Tree-based ortholog | 1-to-many | OS01G71106 OS05G23250 | 2 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00162G00950 PP00231G00180 | 2 | |
| Tree-based ortholog | 1-to-1 | PP00162G00950 | 1 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-many | SI006G01470 SI006G01460 SI008G08600 ... | 5 | |
| Tree-based ortholog | 1-to-many | SI002G18180 SI005G46380 SI008G07880 ... | 8 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL04G056570 SL04G007320 SL02G082050 ... | 4 | |
| Tree-based ortholog | 1-to-1 | SL01G113620 | 1 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB07G002360 | 1 | |
| Tree-based ortholog | 1-to-many | SB02G021560 SB09G001295 SB05G003285 ... | 6 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV18G11900 VV18G13570 VV12G05600 ... | 6 | |
| Tree-based ortholog | 1-to-many | VV18G13250 VV18G14840 VV18G13840 ... | 51 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM10G00840 ZM10G00490 ZM10G00520 | 3 | |
| Tree-based ortholog | 1-to-1 | ZM02G37150 | 1 |