Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
MA01G15360
(Musa acuminata)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Musa acuminata | Orthologous gene family | MA01G15360 | 1 |  |
| Anchor point | MA03G00740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | MA03G00740 MA01G15360 | 2 | ||
| Tree-based ortholog | MA07G03820 MA09G20780 MA03G00740 ... | 4 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT3G16640 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G16640 | 1 | ||
| Tree-based ortholog | many-to-1 | AT3G05540 | 1 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD4G10920 | 1 | |
| Tree-based ortholog | many-to-1 | BD4G10920 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP01597G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00327G00030 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00327G00030 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV7750G00010 | 1 | |
| Tree-based ortholog | many-to-1 | HV7750G00010 | 1 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_11G31910 | 1 | |
| Tree-based ortholog | many-to-1 | OSINDICA_11G31970 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS11G43900 | 1 | |
| Tree-based ortholog | many-to-1 | OS11G43900 | 1 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-1 | PP00033G00980 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00027G00260 PP00033G00980 | 2 | ||
| Tree-based ortholog | many-to-many | PP00033G00980 PP00027G00260 | 2 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT05G02480 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT08G22120 PT08G22650 PT05G02480 | 3 | ||
| Tree-based ortholog | many-to-1 | PT05G02480 | 1 | ||
| Setaria italica | Orthologous gene family | 1-to-1 | SI008G22750 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI008G22750 | 1 | ||
| Tree-based ortholog | many-to-1 | SI008G22750 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL01G099770 SL01G099780 | 2 | |
| Tree-based ortholog | many-to-many | SL01G099780 SL01G099770 | 2 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB04G000750 | 1 | |
| Tree-based ortholog | many-to-many | SB05G019035 SB04G000750 | 2 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV05G02800 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV05G02800 | 1 | ||
| Tree-based ortholog | many-to-1 | VV14G08740 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM05G17030 ZM05G17040 | 2 | |
| Tree-based ortholog | many-to-many | ZM05G17040 ZM05G17030 | 2 |