Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CP00213G00010
(Carica papaya)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | CP00213G00010 | 1 |  |
| Tree-based ortholog | CP00213G00010 | 1 | ||
| Orthologous gene family | CP00053G00140 CP00069G00760 CP00199G00080 ... | 5 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | AT5G65240 AT5G10290 | 2 | |
| Tree-based ortholog | 1-to-many | AT5G65240 AT5G10290 | 2 | ||
| Orthologous gene family | many-to-many | AT1G34210 AT4G33430 AT5G63710 | 3 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD1G10950 | 1 | |
| Tree-based ortholog | 1-to-many | BD1G10950 BD3G10397 | 2 | ||
| Orthologous gene family | many-to-many | BD1G10950 BD3G09060 BD3G10397 ... | 7 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV83805G00010 | 1 | |
| Tree-based ortholog | 1-to-1 | HV83805G00010 | 1 | ||
| Orthologous gene family | many-to-1 | HV1569049G00010 | 1 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MA08G24090 | 1 | |
| Tree-based ortholog | 1-to-1 | MA08G24090 | 1 | ||
| Orthologous gene family | many-to-many | MA01G16780 MA02G15170 MA02G22810 ... | 12 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_02G17200 | 1 | |
| Tree-based ortholog | 1-to-many | OSINDICA_02G17200 OSINDICA_03G47950 | 2 | ||
| Orthologous gene family | many-to-many | OSINDICA_03G47950 OSINDICA_04G30020 | 2 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G18320 | 1 | |
| Tree-based ortholog | 1-to-many | OS02G18320 OS03G49620 | 2 | ||
| Orthologous gene family | many-to-many | OS04G38480 OS05G07850 OS06G16330 ... | 4 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00035G01240 PP00096G00390 | 2 | |
| Tree-based ortholog | 1-to-many | PP00217G00330 PP00014G00970 | 2 | ||
| Orthologous gene family | many-to-many | PP00025G00340 PP00060G00260 PP00096G00390 ... | 4 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT07G09450 PT05G07420 | 2 | |
| Tree-based ortholog | 1-to-many | PT05G07420 PT07G09450 | 2 | ||
| Orthologous gene family | many-to-many | PT01G20670 PT01G30600 PT04G05910 ... | 8 | ||
| Anchor point | N/A | PT05G07420 PT07G09450 | 2 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI001G13160 | 1 | |
| Tree-based ortholog | 1-to-many | SI009G12520 SI001G13160 | 2 | ||
| Orthologous gene family | many-to-many | SI001G13160 SI001G21690 SI005G12060 ... | 6 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | SL03G078520 SL11G008960 | 2 | |
| Tree-based ortholog | 1-to-many | SL11G008960 SL03G078520 | 2 | ||
| Orthologous gene family | many-to-many | SL02G072310 SL02G089550 SL04G005910 ... | 5 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB04G011060 | 1 | |
| Tree-based ortholog | 1-to-1 | SB04G011060 | 1 | ||
| Orthologous gene family | many-to-1 | SB04G008570 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G00250 | 1 | |
| Tree-based ortholog | 1-to-many | VV00G02400 VV00G02380 VV00G02440 | 3 | ||
| Orthologous gene family | many-to-many | VV07G06170 VV11G07850 VV12G08840 ... | 5 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G49950 | 1 | |
| Tree-based ortholog | 1-to-many | ZM01G49950 ZM05G24440 | 2 | ||
| Orthologous gene family | many-to-many | ZM05G39200 ZM06G17210 ZM06G21460 | 3 |