Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CP00005G03320
(Carica papaya)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Carica papaya | Orthologous gene family | CP00005G03320 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | CP00005G03320 | 1 | ||
| Tree-based ortholog | CP00005G03320 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT1G70180 | 1 | |
| Anchor point | N/A | AT1G70180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G70180 | 1 | ||
| Tree-based ortholog | 1-to-1 | AT1G70180 | 1 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD5G12680 | 1 | |
| Tree-based ortholog | 1-to-1 | BD5G12680 | 1 | ||
| Hordeum vulgare | Orthologous gene family | 1-to-1 | HV8801G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV8801G00010 | 1 | ||
| Tree-based ortholog | 1-to-1 | HV8801G00010 | 1 | ||
| Musa acuminata | Orthologous gene family | 1-to-many | MA09G28900 MA10G32000 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA07G20380 MA09G28900 MA10G32000 | 3 | ||
| Tree-based ortholog | 1-to-many | MA10G32000 MA07G20380 MA09G28900 | 3 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_04G31050 | 1 | |
| Tree-based ortholog | 1-to-1 | OSINDICA_04G31050 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G39090 | 1 | |
| Tree-based ortholog | 1-to-1 | OS04G39090 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00093G00490 PP00050G00750 PP00106G00170 | 3 | |
| Populus trichocarpa | Anchor point | N/A | PT08G19330 PT10G03650 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT08G19330 PT10G03650 | 2 | ||
| Tree-based ortholog | 1-to-many | PT08G19330 PT10G03650 | 2 | ||
| Setaria italica | Orthologous gene family | 1-to-1 | SI007G13330 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI007G13330 | 1 | ||
| Tree-based ortholog | 1-to-1 | SI007G13330 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL02G087220 | 1 | |
| Anchor point | N/A | SL02G087220 SL05G006320 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G006320 | 1 | ||
| Tree-based ortholog | 1-to-1 | SL05G006320 | 1 | ||
| Sorghum bicolor | Orthologous gene family | 1-to-1 | SB06G019260 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB06G019260 | 1 | ||
| Tree-based ortholog | 1-to-1 | SB06G019260 | 1 | ||
| Vitis vinifera | Anchor point | N/A | VV01G13320 VV17G02320 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV01G13320 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV01G13320 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM10G18400 | 1 | |
| Tree-based ortholog | 1-to-many | ZM10G18400 ZM02G12950 | 2 |