Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT4G14550
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT3G23050 AT4G14550 | 2 |  |
| Anchor point | AT3G23030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT4G14550 AT3G23050 | 2 | ||
| Tree-based ortholog | AT4G14550 AT3G23050 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Brachypodium distachyon | Anchor point | 1-to-many | BD1G55370 BD1G09090 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD4G02600 | 1 | ||
| Tree-based ortholog | many-to-many | BD4G02600 BD1G14240 | 2 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00058G00290 | 1 | |
| Tree-based ortholog | many-to-1 | CP01476G00010 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV6282G00010 | 1 | |
| Tree-based ortholog | many-to-many | HV39003G00010 HV43573G00030 HV2554230G00010 | 3 | ||
| Musa acuminata | Anchor point | 1-to-many | MA09G26160 MA04G21630 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA09G26160 MA10G08850 MA04G21630 ... | 5 | ||
| Tree-based ortholog | many-to-many | MA09G26160 MA08G21140 MA04G21630 | 3 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_12G28860 | 1 | |
| Tree-based ortholog | many-to-1 | OSINDICA_12G28860 | 1 | ||
| Oryza sativa ssp. japonica | Anchor point | 1-to-1 | OS03G53150 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS12G40890 | 1 | ||
| Tree-based ortholog | many-to-1 | OS12G40890 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-1 | PP00184G00110 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00073G00060 PP00184G00110 | 2 | ||
| Tree-based ortholog | many-to-1 | PP00184G00110 | 1 | ||
| Populus trichocarpa | Anchor point | 1-to-many | PT02G04490 PT10G07830 PT08G16110 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT10G07830 PT08G16120 | 2 | ||
| Tree-based ortholog | many-to-1 | PT10G07830 | 1 | ||
| Setaria italica | Anchor point | 1-to-many | SI003G38890 SI009G09540 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI003G38890 | 1 | ||
| Tree-based ortholog | many-to-1 | SI009G16730 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL09G083290 | 1 | |
| Anchor point | 1-to-many | SL09G065850 SL06G053830 SL09G083280 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL09G083290 | 1 | ||
| Tree-based ortholog | many-to-1 | SL09G083290 | 1 | ||
| Sorghum bicolor | Anchor point | 1-to-1 | SB08G020580 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB08G020580 | 1 | ||
| Tree-based ortholog | many-to-1 | SB08G020580 | 1 | ||
| Vitis vinifera | Anchor point | 1-to-1 | VV05G05910 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV05G05920 | 1 | ||
| Tree-based ortholog | many-to-1 | VV07G01540 | 1 | ||
| Zea mays | Anchor point | 1-to-many | ZM03G16030 ZM01G52350 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM03G16030 | 1 | ||
| Tree-based ortholog | many-to-many | ZM03G03230 ZM08G04470 | 2 |