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Integrative Orthology Viewer:
AT3G55090
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT3G55090 | 1 |  |
| Anchor point | AT2G39350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT2G39350 AT3G55090 | 2 | ||
| Tree-based ortholog | AT2G39350 AT3G55090 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Brachypodium distachyon | Anchor point | 1-to-many | BD1G66110 BD2G54300 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G66120 | 1 | ||
| Tree-based ortholog | many-to-1 | BD1G66120 | 1 | ||
| Carica papaya | Anchor point | 1-to-many | CP00114G00170 CP00001G02930 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00001G02930 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00114G00170 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR02G06300 | 1 | |
| Tree-based ortholog | many-to-1 | CR02G06300 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV1560011G00010 | 1 | |
| Tree-based ortholog | many-to-1 | HV1560011G00010 | 1 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA08G02190 MA05G29230 MA06G34130 | 3 | |
| Tree-based ortholog | many-to-many | MA08G02190 MA06G34130 MA06G09070 | 3 | ||
| Oryza sativa ssp. indica | Anchor point | 1-to-many | OSINDICA_01G58630 OSINDICA_03G15960 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_03G15960 | 1 | ||
| Tree-based ortholog | many-to-1 | OSINDICA_03G15970 | 1 | ||
| Oryza sativa ssp. japonica | Anchor point | 1-to-many | OS03G17350 OS01G61940 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G17350 | 1 | ||
| Tree-based ortholog | many-to-1 | OS03G17350 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL20G01830 | 1 | |
| Tree-based ortholog | many-to-many | OL05G03430 OL20G01830 OL10G01760 ... | 4 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00114G00940 PP00009G01160 | 2 | |
| Tree-based ortholog | many-to-many | PP00306G00490 PP00112G00390 PP00116G00080 ... | 5 | ||
| Populus trichocarpa | Anchor point | 1-to-many | PT10G21340 PT08G04790 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT08G04790 PT10G21340 | 2 | ||
| Tree-based ortholog | many-to-1 | PT08G04790 | 1 | ||
| Setaria italica | Anchor point | 1-to-1 | SI009G46070 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI009G46090 | 1 | ||
| Tree-based ortholog | many-to-1 | SI005G38090 | 1 | ||
| Solanum lycopersicum | Anchor point | 1-to-many | SL09G005970 SL05G054890 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL05G054890 | 1 | ||
| Tree-based ortholog | many-to-many | SL04G010210 SL04G010200 SL05G054890 | 3 | ||
| Sorghum bicolor | Anchor point | 1-to-1 | SB01G038970 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB01G038970 | 1 | ||
| Tree-based ortholog | many-to-1 | SB01G038970 | 1 | ||
| Vitis vinifera | Anchor point | 1-to-many | VV08G02050 VV13G08790 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV13G08790 | 1 | ||
| Tree-based ortholog | many-to-1 | VV13G08790 | 1 | ||
| Zea mays | Anchor point | 1-to-1 | ZM01G11800 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G11800 | 1 | ||
| Tree-based ortholog | many-to-many | ZM08G21120 ZM06G04300 | 2 |