Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT3G48870
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | AT3G48870 AT5G50920 | 2 |  |
| Tree-based ortholog | AT3G45450 AT3G48870 | 2 | ||
| Orthologous gene family | AT3G48870 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD3G44340 | 1 | |
| Tree-based ortholog | many-to-many | BD3G44340 BD4G39880 | 2 | ||
| Orthologous gene family | 1-to-many | BD1G01040 BD1G01180 BD1G10690 ... | 5 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00013G01940 | 1 | |
| Tree-based ortholog | many-to-1 | CP01024G00020 | 1 | ||
| Orthologous gene family | 1-to-1 | CP00014G01510 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR02G04000 | 1 | |
| Tree-based ortholog | many-to-many | CR11G01200 CR12G11010 CR02G04000 | 3 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV64214G00020 | 1 | |
| Tree-based ortholog | many-to-many | HV64214G00020 HV274543G00010 | 2 | ||
| Orthologous gene family | 1-to-many | HV216684G00010 HV274543G00010 | 2 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA03G19080 | 1 | |
| Tree-based ortholog | many-to-many | MA03G19080 MA06G16890 MA08G09510 | 3 | ||
| Orthologous gene family | 1-to-many | MA03G19080 MA06G16890 MA08G09510 | 3 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_12G10050 | 1 | |
| Tree-based ortholog | many-to-1 | OSINDICA_04G24670 | 1 | ||
| Orthologous gene family | 1-to-1 | OSINDICA_10G05750 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS04G32560 | 1 | |
| Tree-based ortholog | many-to-many | OS11G16770 OS11G16590 | 2 | ||
| Orthologous gene family | 1-to-1 | OS02G19450 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL20G01070 | 1 | |
| Tree-based ortholog | many-to-many | OL01G00740 OL07G02300 | 2 | ||
| Orthologous gene family | 1-to-1 | OL07G02300 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00023G00490 PP00252G00290 PP00081G00260 ... | 4 | |
| Tree-based ortholog | many-to-many | PP00023G00490 PP00081G00260 PP00088G00990 | 3 | ||
| Orthologous gene family | 1-to-many | PP00023G00490 PP00081G00260 | 2 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT15G10510 PT12G10590 | 2 | |
| Tree-based ortholog | many-to-1 | PT12G10590 | 1 | ||
| Anchor point | N/A | PT15G10510 PT12G10590 | 2 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI007G08280 | 1 | |
| Tree-based ortholog | many-to-1 | SI006G07490 | 1 | ||
| Orthologous gene family | 1-to-many | SI001G19420 SI001G19430 | 2 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL12G042060 SL03G118340 | 2 | |
| Tree-based ortholog | many-to-1 | SL12G042060 | 1 | ||
| Orthologous gene family | 1-to-many | SL06G011400 SL12G042060 | 2 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB06G014590 | 1 | |
| Tree-based ortholog | many-to-1 | SB07G002440 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV17G08930 | 1 | |
| Tree-based ortholog | many-to-1 | VV14G13810 | 1 | ||
| Orthologous gene family | 1-to-1 | VV14G13810 | 1 | ||
| Anchor point | N/A | VV17G08930 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM10G15640 | 1 | |
| Tree-based ortholog | many-to-1 | ZM10G15640 | 1 | ||
| Orthologous gene family | 1-to-1 | ZM10G15640 | 1 |