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Integrative Orthology Viewer:
AT3G04960
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT3G04960 | 1 |  |
| Anchor point | AT5G27240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT3G05110 AT5G27240 AT4G27980 ... | 4 | ||
| Tree-based ortholog | AT4G27980 AT3G05110 AT3G04960 | 3 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-many | BD2G13157 BD1G76707 | 2 | |
| Tree-based ortholog | many-to-1 | BD1G27390 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00043G00630 | 1 | |
| Tree-based ortholog | many-to-1 | CP00079G00420 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV1570703G00010 | 1 | |
| Tree-based ortholog | many-to-1 | HV1578202G00010 | 1 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA02G02450 MA05G00460 | 2 | |
| Tree-based ortholog | many-to-many | MA11G11050 MA04G05770 | 2 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_11G27520 | 1 | |
| Tree-based ortholog | many-to-1 | OSINDICA_11G27630 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS11G36960 | 1 | |
| Tree-based ortholog | many-to-1 | OS11G36560 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00001G03210 PP00052G01000 PP00058G01400 | 3 | |
| Tree-based ortholog | many-to-many | PP00052G01000 PP00001G03210 | 2 | ||
| Populus trichocarpa | Anchor point | 1-to-many | PT13G02950 PT05G04320 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT05G04320 PT13G02950 | 2 | ||
| Tree-based ortholog | many-to-1 | PT03G09780 | 1 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI007G12760 | 1 | |
| Tree-based ortholog | many-to-many | SI007G28980 SI008G16460 | 2 | ||
| Solanum lycopersicum | Anchor point | 1-to-many | SL01G098250 SL01G067770 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL01G098250 SL08G029220 | 2 | ||
| Tree-based ortholog | many-to-many | SL01G098340 SL01G098330 SL01G098310 ... | 4 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB05G001350 | 1 | |
| Tree-based ortholog | many-to-many | SB05G022440 SB07G004805 | 2 | ||
| Vitis vinifera | Anchor point | 1-to-1 | VV05G03630 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV14G04470 | 1 | ||
| Tree-based ortholog | many-to-1 | VV01G04870 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM10G17950 ZM10G17970 | 2 | |
| Tree-based ortholog | many-to-many | ZM07G06860 ZM08G01880 | 2 |