Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT2G45340
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT2G45340 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | AT2G45340 | 1 | ||
| Tree-based ortholog | AT2G45340 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Brachypodium distachyon | Anchor point | N/A | BD1G51630 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD1G51630 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00003G02840 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00003G02840 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV37171G00010 | 1 | |
| Tree-based ortholog | 1-to-1 | HV2547252G00010 | 1 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA02G03250 MA11G17110 MA11G00910 | 3 | |
| Tree-based ortholog | 1-to-many | MA11G00910 MA11G17110 MA02G03250 | 3 | ||
| Oryza sativa ssp. indica | Anchor point | N/A | OSINDICA_06G03280 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_06G03280 | 1 | ||
| Tree-based ortholog | 1-to-many | OSINDICA_08G01640 OSINDICA_06G03280 | 2 | ||
| Oryza sativa ssp. japonica | Anchor point | N/A | OS06G04370 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G04370 | 1 | ||
| Tree-based ortholog | 1-to-1 | OS06G04370 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00155G00110 PP00480G00070 | 2 | |
| Tree-based ortholog | 1-to-1 | PP00155G00110 | 1 | ||
| Populus trichocarpa | Anchor point | N/A | PT14G06870 PT12G12870 PT03G11510 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT02G14700 PT14G06870 | 2 | ||
| Tree-based ortholog | 1-to-1 | PT15G05210 | 1 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI006G08220 | 1 | |
| Tree-based ortholog | 1-to-many | SI005G26610 SI006G08220 SI004G02390 | 3 | ||
| Solanum lycopersicum | Anchor point | N/A | SL08G079460 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G091230 | 1 | ||
| Tree-based ortholog | 1-to-1 | SL03G083510 | 1 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB07G001690 | 1 | |
| Tree-based ortholog | 1-to-many | SB07G000703 SB03G025880 SB10G002300 | 3 | ||
| Vitis vinifera | Anchor point | N/A | VV15G09050 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV16G03480 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV02G00890 | 1 | ||
| Zea mays | Anchor point | N/A | ZM09G05450 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM09G05450 | 1 | ||
| Tree-based ortholog | 1-to-1 | ZM03G38040 | 1 |