Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT1G20560
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | AT1G20560 | 1 |  |
| Tree-based ortholog | AT1G20560 | 1 | ||
| Orthologous gene family | AT1G20560 | 1 | ||
| Anchor point | AT1G76290 AT2G17650 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD1G76157 | 1 | |
| Tree-based ortholog | 1-to-many | BD1G76170 BD1G76157 BD1G76147 ... | 4 | ||
| Anchor point | many-to-1 | BD3G01740 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00010G01790 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00026G01910 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR03G15830 | 1 | |
| Tree-based ortholog | 1-to-1 | CR03G15830 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV37207G00010 | 1 | |
| Tree-based ortholog | 1-to-many | HV48690G00010 HV37207G00010 HV63738G00010 ... | 4 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MA02G11260 | 1 | |
| Tree-based ortholog | 1-to-many | MA02G11260 MA03G15090 MA03G15100 | 3 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_03G03020 | 1 | |
| Tree-based ortholog | 1-to-many | OSINDICA_03G03020 OSINDICA_03G03030 OSINDICA_02G01850 | 3 | ||
| Anchor point | many-to-1 | OSINDICA_02G01850 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G04120 | 1 | |
| Tree-based ortholog | 1-to-many | OS03G04120 OS03G04130 OS02G02700 ... | 4 | ||
| Anchor point | many-to-1 | OS02G02700 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL02G00160 | 1 | |
| Tree-based ortholog | 1-to-many | OL01G06260 OL10G01670 OL04G05140 ... | 4 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00220G00210 | 1 | |
| Tree-based ortholog | 1-to-1 | PP00007G01680 | 1 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT02G01060 PT05G25070 | 2 | |
| Tree-based ortholog | 1-to-many | PT02G01060 PT05G25070 | 2 | ||
| Anchor point | many-to-many | PT05G10290 PT05G25070 PT05G09950 ... | 4 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI009G56750 | 1 | |
| Tree-based ortholog | 1-to-many | SI009G56770 SI009G56750 SI009G56760 ... | 4 | ||
| Anchor point | many-to-1 | SI001G11510 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | SL08G075810 SL06G008920 | 2 | |
| Tree-based ortholog | 1-to-many | SL10G012100 SL08G075800 SL08G075810 ... | 4 | ||
| Anchor point | many-to-1 | SL02G082870 | 1 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB01G048090 | 1 | |
| Tree-based ortholog | 1-to-many | SB01G048090 SB01G048050 SB01G048080 ... | 5 | ||
| Anchor point | many-to-1 | SB04G001460 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | VV04G06800 VV04G06830 | 2 | |
| Tree-based ortholog | 1-to-1 | VV18G12180 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G02550 | 1 | |
| Tree-based ortholog | 1-to-many | ZM01G02550 ZM01G02560 ZM05G17610 | 3 | ||
| Anchor point | many-to-1 | ZM05G17610 | 1 |