Functional clusters
Information
- Type
- Mapman term
- Identifier
- 34.15
- Description
- transport.potassium
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Brassica rapa | A03 | 17 | CH_bra_256 | 3 | 4 | 0.000507463 |
Chlamydomonas reinhardtii | chromosome_1 | 17 | CH_cre_20 | 4 | 5 | 0.000000329842 |
Chlamydomonas reinhardtii | chromosome_17 | 17 | CH_cre_29 | 4 | 8 | 0.00000460315 |
Eucalyptus grandis | scaffold_4 | 17 | CH_egr_422 | 5 | 9 | 0.000000060649 |
Eucalyptus grandis | scaffold_7 | 17 | CH_egr_557 | 5 | 17 | 0.00000294598 |
Eucalyptus grandis | scaffold_8 | 17 | CH_egr_754 | 3 | 3 | 0.000176433 |
Eucalyptus grandis | scaffold_8 | 17 | CH_egr_487 | 4 | 4 | 0.000000294813 |
Glycine max | Gm18 | 17 | CH_gma_491 | 3 | 4 | 0.000936094 |
Gossypium raimondii | Chr02 | 17 | CH_gra_293 | 3 | 3 | 0.000216064 |
Malus domestica | 3 | 17 | CH_mdo_140 | 4 | 7 | 0.00000741682 |
Populus trichocarpa | Chr01 | 17 | CH_ptr_397 | 3 | 3 | 0.000233066 |
Prunus persica | scaffold_4 | 17 | CH_ppe_346 | 3 | 3 | 0.000096194 |
Solanum lycopersicum | ch09 | 17 | CH_sly_466 | 3 | 4 | 0.0007517 |
Solanum lycopersicum | ch12 | 17 | CH_sly_381 | 3 | 3 | 0.00018817 |
Vitis vinifera | chr7 | 17 | CH_vvi_103 | 6 | 9 | 0.0000000000588243 |
Zea mays | 1 | 17 | CH_zma_83 | 4 | 4 | 0.000000292512 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |