Functional clusters
Information
- Type
- Mapman term
- Identifier
- 34.14
- Description
- transport.unspecified cations
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis thaliana | 4 | 17 | CH_ath_198 | 4 | 6 | 0.00000154537 |
Arabidopsis thaliana | 5 | 17 | CH_ath_385 | 3 | 5 | 0.000805092 |
Brassica rapa | A09 | 17 | CH_bra_30 | 5 | 5 | 0.000000000410378 |
Capsella rubella | scaffold_6 | 17 | CH_cru_139 | 4 | 4 | 0.00000019876 |
Chlamydomonas reinhardtii | chromosome_8 | 17 | CH_cre_61 | 5 | 50 | 0.000426807 |
Eucalyptus grandis | scaffold_3 | 17 | CH_egr_435 | 6 | 20 | 0.0000000774233 |
Eucalyptus grandis | scaffold_4 | 17 | CH_egr_552 | 4 | 5 | 0.0000027673 |
Eucalyptus grandis | scaffold_5 | 17 | CH_egr_768 | 3 | 3 | 0.00028223 |
Oryza sativa ssp. japonica | 7 | 17 | CH_osa_148 | 6 | 40 | 0.0000000792943 |
Populus trichocarpa | Chr01 | 17 | CH_ptr_368 | 4 | 13 | 0.000138317 |
Populus trichocarpa | Chr04 | 17 | CH_ptr_367 | 3 | 3 | 0.000134865 |
Prunus persica | scaffold_4 | 17 | CH_ppe_157 | 5 | 8 | 0.0000000108801 |
Solanum lycopersicum | ch02 | 17 | CH_sly_462 | 3 | 5 | 0.00070469 |
Vitis vinifera | chr11 | 17 | CH_vvi_119 | 6 | 13 | 0.000000000912516 |
Zea mays | 7 | 17 | CH_zma_189 | 3 | 3 | 0.000111012 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |