Binding site page : Motif_650


Identifier
Motif_650
Name
SITEIIAOSPCNA
Description
Site IIa of rice PCNA (proliferating cell nuclear antigen) gene; Found at -197 to -188; Binding site for two nuclear proteins, PCF1 and PCF2; Suggested to be involved in meristematic tissue-specific expression; Resemble the conserved motif (T/GGTCCCAT) found in promoter regions of auxin-regulated genes; See AUXREPSIAA4
Number of genes
22
Associated publications
Sequence
TGGGCCCGT
Positional Weight Matrix

Binding site distribution per species

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Binding site distribition per location

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Gene List

Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 22 total, starting on record 1, ending on 20

gene_id species strand chr type
GM06G09190 gma + Gm06 coding
GM04G40000 gma - Gm04 coding
GM06G14850 gma + Gm06 coding
PPE_001G37240 ppe + scaffold_1 coding
AT3G28455 ath - 3 coding
BR03G21170 bra + A03 coding
EG0004G14960 egr + scaffold_4 coding
EG0005G05580 egr + scaffold_5 coding
EG0010G18300 egr - scaffold_10 coding
VV02G06520 vvi + chr2 coding
VV09G02890 vvi - chr9 coding
VV18G07170 vvi + chr18 coding
VV18G13000 vvi - chr18 coding
VV10G02160 vvi + chr10 coding
VV18G07160 vvi + chr18 coding
SL04G079930 sly - ch04 coding
SL09G009860 sly + ch09 coding
ST04G033200 stu - chr04 coding
ST09G010190 stu - chr09 coding
CM00052G00790 cme - CM3.5_scaffold00052 coding

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