PLAZA 3.0 Dicots : Binding Sites

InterPro domains associated with a binding site

Binding site: Motif_650
Name: SITEIIAOSPCNA
Description: Site IIa of rice PCNA (proliferating cell nuclear antigen) gene; Found at -197 to -188; Binding site for two nuclear proteins, PCF1 and PCF2; Suggested to be involved in meristematic tissue-specific expression; Resemble the conserved motif (T/GGTCCCAT) found in promoter regions of auxin-regulated genes; See AUXREPSIAA4

#Associated genes: 22
#Associated InterPro terms: 56

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InterPro	Description	#Associated genes	bra	cme	egr	gma	ptr	ppe	sly	stu	vvi
IPR014733	Barwin-like endoglucanase	2 (9.09%)	0	0	0	2	0	0	0	0	0
IPR006936	Domain of unknown function DUF640	2 (9.09%)	1	0	0	0	0	0	0	0	1
IPR002963	Expansin	2 (9.09%)	0	0	0	2	0	0	0	0	0
IPR007117	Expansin, cellulose-binding-like domain	2 (9.09%)	0	0	0	2	0	0	0	0	0
IPR007118	Expansin/Lol pI	2 (9.09%)	0	0	0	2	0	0	0	0	0
IPR007112	Expansin/pollen allergen, DPBB domain	2 (9.09%)	0	0	0	2	0	0	0	0	0
IPR002109	Glutaredoxin	2 (9.09%)	0	0	0	0	0	0	1	1	0
IPR025718	Histone deacetylase complex subunit SAP30, Sin3 binding domain	2 (9.09%)	0	0	0	0	0	0	1	1	0
IPR024145	Histone deacetylase complex subunit SAP30/SAP30-like	2 (9.09%)	0	0	0	0	0	0	1	1	0
IPR003347	JmjC domain	2 (9.09%)	0	0	1	0	0	0	0	0	1
IPR013637	Lysine-specific demethylase-like domain	2 (9.09%)	0	0	1	0	0	0	0	0	1
IPR000719	Protein kinase domain	2 (9.09%)	0	0	0	1	0	0	0	0	1
IPR011009	Protein kinase-like domain	2 (9.09%)	0	0	0	1	0	0	0	0	1
IPR009009	RlpA-like double-psi beta-barrel domain	2 (9.09%)	0	0	0	2	0	0	0	0	0
IPR002290	Serine/threonine- / dual specificity protein kinase, catalytic domain	2 (9.09%)	0	0	0	1	0	0	0	0	1
IPR008271	Serine/threonine-protein kinase, active site	2 (9.09%)	0	0	0	1	0	0	0	0	1
IPR012336	Thioredoxin-like fold	2 (9.09%)	0	0	0	0	0	0	1	1	0
IPR004198	Zinc finger, C5HC2-type	2 (9.09%)	0	0	1	0	0	0	0	0	1
IPR011011	Zinc finger, FYVE/PHD-type	2 (9.09%)	0	0	1	0	0	0	0	0	1
IPR019787	Zinc finger, PHD-finger	2 (9.09%)	0	0	1	0	0	0	0	0	1
IPR001965	Zinc finger, PHD-type	2 (9.09%)	0	0	1	0	0	0	0	0	1
IPR019786	Zinc finger, PHD-type, conserved site	2 (9.09%)	0	0	1	0	0	0	0	0	1
IPR013083	Zinc finger, RING/FYVE/PHD-type	2 (9.09%)	0	0	1	0	0	0	0	0	1
IPR001606	ARID/BRIGHT DNA-binding domain	1 (4.55%)	0	0	1	0	0	0	0	0	0
IPR020683	Ankyrin repeat-containing domain	1 (4.55%)	0	0	0	0	0	0	0	0	1
IPR016169	CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2	1 (4.55%)	0	0	0	0	1	0	0	0	0
IPR011006	CheY-like superfamily	1 (4.55%)	0	0	1	0	0	0	0	0	0
IPR022796	Chlorophyll A-B binding protein	1 (4.55%)	0	0	0	0	0	0	0	0	1
IPR023329	Chlorophyll a/b binding protein domain	1 (4.55%)	0	0	0	0	0	0	0	0	1
IPR013320	Concanavalin A-like lectin/glucanase, subgroup	1 (4.55%)	0	0	0	0	0	0	0	0	1
IPR015345	Cytokinin dehydrogenase 1, FAD/cytokinin binding domain	1 (4.55%)	0	0	0	0	1	0	0	0	0
IPR003657	DNA-binding WRKY	1 (4.55%)	0	1	0	0	0	0	0	0	0
IPR015566	Endoplasmin	1 (4.55%)	0	0	0	0	0	1	0	0	0
IPR006094	FAD linked oxidase, N-terminal	1 (4.55%)	0	0	0	0	1	0	0	0	0
IPR016166	FAD-binding, type 2	1 (4.55%)	0	0	0	0	1	0	0	0	0
IPR016167	FAD-binding, type 2, subdomain 1	1 (4.55%)	0	0	0	0	1	0	0	0	0
IPR016164	FAD-linked oxidase-like, C-terminal	1 (4.55%)	0	0	0	0	1	0	0	0	0
IPR001404	Heat shock protein Hsp90 family	1 (4.55%)	0	0	0	0	0	1	0	0	0
IPR020575	Heat shock protein Hsp90, N-terminal	1 (4.55%)	0	0	0	0	0	1	0	0	0
IPR019805	Heat shock protein Hsp90, conserved site	1 (4.55%)	0	0	0	0	0	1	0	0	0
IPR003594	Histidine kinase-like ATPase, ATP-binding domain	1 (4.55%)	0	0	0	0	0	1	0	0	0
IPR009057	Homeodomain-like	1 (4.55%)	0	1	0	0	0	0	0	0	0
IPR017930	Myb domain	1 (4.55%)	0	1	0	0	0	0	0	0	0
IPR006447	Myb domain, plants	1 (4.55%)	0	1	0	0	0	0	0	0	0
IPR017441	Protein kinase, ATP binding site	1 (4.55%)	0	0	0	1	0	0	0	0	0
IPR020568	Ribosomal protein S5 domain 2-type fold	1 (4.55%)	0	0	0	0	0	1	0	0	0
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	1 (4.55%)	0	0	0	0	0	0	0	0	1
IPR001005	SANT/Myb domain	1 (4.55%)	0	1	0	0	0	0	0	0	0
IPR001789	Signal transduction response regulator, receiver domain	1 (4.55%)	0	0	1	0	0	0	0	0	0
IPR003349	Transcription factor jumonji, JmjN	1 (4.55%)	0	0	1	0	0	0	0	0	0
IPR004333	Transcription factor, SBP-box	1 (4.55%)	0	0	0	0	0	0	0	0	1
IPR006461	Uncharacterised protein family Cys-rich	1 (4.55%)	0	0	1	0	0	0	0	0	0
IPR006016	UspA	1 (4.55%)	0	0	0	0	0	0	0	0	1
IPR013863	Vacuolar import/degradation, Vid27-related	1 (4.55%)	0	0	0	0	0	0	0	0	1
IPR016170	Vanillyl-alcohol oxidase/Cytokinin dehydrogenase C-terminal domain	1 (4.55%)	0	0	0	0	1	0	0	0	0
IPR015943	WD40/YVTN repeat-like-containing domain	1 (4.55%)	0	0	0	0	0	0	0	0	1