PLAZA 3.0 Dicots : Binding Sites

MapMan terms associated with a binding site

Binding site: Motif_650
Name: SITEIIAOSPCNA
Description: Site IIa of rice PCNA (proliferating cell nuclear antigen) gene; Found at -197 to -188; Binding site for two nuclear proteins, PCF1 and PCF2; Suggested to be involved in meristematic tissue-specific expression; Resemble the conserved motif (T/GGTCCCAT) found in promoter regions of auxin-regulated genes; See AUXREPSIAA4

#Associated genes: 22
#Associated MapMan terms: 25

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MapMan	Description	#Associated genes	ath	egr	gma	ptr	ppe	sly	vvi
27	RNA	3 (13.64%)	0	2	0	0	0	0	1
27.3	RNA.regulation of transcription	3 (13.64%)	0	2	0	0	0	0	1
33	development	3 (13.64%)	1	0	0	0	0	0	2
10	cell wall	2 (9.09%)	0	0	2	0	0	0	0
10.7	cell wall.modification	2 (9.09%)	0	0	2	0	0	0	0
27.3.57	RNA.regulation of transcription.JUMONJI family	2 (9.09%)	0	1	0	0	0	0	1
29	protein	2 (9.09%)	0	0	1	0	0	0	1
29.4	protein.postranslational modification	2 (9.09%)	0	0	1	0	0	0	1
33.99	development.unspecified	2 (9.09%)	1	0	0	0	0	0	1
1	PS	1 (4.55%)	0	0	0	0	0	0	1
1.1	PS.lightreaction	1 (4.55%)	0	0	0	0	0	0	1
1.1.1	PS.lightreaction.photosystem II	1 (4.55%)	0	0	0	0	0	0	1
1.1.1.1	PS.lightreaction.photosystem II.LHC-II	1 (4.55%)	0	0	0	0	0	0	1
17	hormone metabolism	1 (4.55%)	0	0	0	1	0	0	0
17.4	hormone metabolism.cytokinin	1 (4.55%)	0	0	0	1	0	0	0
17.4.1	hormone metabolism.cytokinin.synthesis-degradation	1 (4.55%)	0	0	0	1	0	0	0
20	stress	1 (4.55%)	0	0	0	0	1	0	0
20.2	stress.abiotic	1 (4.55%)	0	0	0	0	1	0	0
20.2.1	stress.abiotic.heat	1 (4.55%)	0	0	0	0	1	0	0
21	redox	1 (4.55%)	0	0	0	0	0	1	0
21.4	redox.glutaredoxins	1 (4.55%)	0	0	0	0	0	1	0
27.3.66	RNA.regulation of transcription.Psudo ARR transcription factor family	1 (4.55%)	0	1	0	0	0	0	0
29.4.1	protein.postranslational modification.kinase	1 (4.55%)	0	0	0	0	0	0	1
29.4.1.57	protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII	1 (4.55%)	0	0	0	0	0	0	1
33.3	development.squamosa promoter binding like (SPL)	1 (4.55%)	0	0	0	0	0	0	1