Binding site page : Motif_619


Identifier
Motif_619
Name
SITEIIBOSPCNA
Description
Site IIb of rice PCNA (proliferating cell nuclear antigen) gene; Found at -178 to -169; Binding site for two nuclear proteins, PCF1 and PCF2; Suggested to be involved in meristematic tissue-specific expression; Resemble the conserved motif (T/GGTCCCAT) found in promoter regions of auxin-regulated genes
Number of genes
121
Associated publications
Sequence
TGGTCCCAC
Positional Weight Matrix

Binding site distribution per species

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Binding site distribition per location

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Gene List

Index of genes with 1 constraints:

Page 1 of 7, showing 20 records out of 121 total, starting on record 1, ending on 20

gene_id species strand chr type
GM01G40130 gma - Gm01 coding
GM06G20320 gma - Gm06 coding
GM11G11350 gma - Gm11 coding
GM11G27900 gma - Gm11 coding
GM12G03520 gma - Gm12 coding
GM13G00520 gma + Gm13 coding
GM16G01400 gma - Gm16 coding
GM17G34010 gma + Gm17 coding
GM13G43210 gma - Gm13 coding
GM02G45640 gma + Gm02 coding
GM03G40611 gma + Gm03 coding
GM05G06810 gma + Gm05 coding
GM08G05550 gma + Gm08 coding
GM10G43720 gma + Gm10 coding
GM14G03180 gma - Gm14 coding
GM14G40320 gma + Gm14 coding
GM15G39780 gma + Gm15 coding
GM17G37820 gma - Gm17 coding
GM19G43280 gma + Gm19 coding
GM20G38420 gma + Gm20 coding

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