InterPro domains associated with a binding site

Binding site
Motif_619
Name
SITEIIBOSPCNA
Description
Site IIb of rice PCNA (proliferating cell nuclear antigen) gene; Found at -178 to -169; Binding site for two nuclear proteins, PCF1 and PCF2; Suggested to be involved in meristematic tissue-specific expression; Resemble the conserved motif (T/GGTCCCAT) found in promoter regions of auxin-regulated genes
#Associated genes
121
#Associated InterPro terms
164

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InterPro Description #Associated genes ath bra cme egr gma ptr ppe sly stu vvi
IPR023271Aquaporin-like7 (5.79%)0002020111
IPR000425Major intrinsic protein7 (5.79%)0002020111
IPR022357Major intrinsic protein, conserved site7 (5.79%)0002020111
IPR001623DnaJ domain5 (4.13%)0000140000
IPR010402CCT domain4 (3.31%)0010110001
IPR004864Late embryogenesis abundant protein, LEA-144 (3.31%)1101001000
IPR011598Myc-type, basic helix-loop-helix (bHLH) domain4 (3.31%)0000300001
IPR027417P-loop containing nucleoside triphosphate hydrolase4 (3.31%)0100000102
IPR000719Protein kinase domain4 (3.31%)0000130000
IPR017441Protein kinase, ATP binding site4 (3.31%)0000130000
IPR011009Protein kinase-like domain4 (3.31%)0000130000
IPR001202WW domain4 (3.31%)0100021000
IPR003311AUX/IAA protein3 (2.48%)0010000110
IPR011525Aux/IAA-ARF-dimerisation3 (2.48%)0010000110
IPR013320Concanavalin A-like lectin/glucanase, subgroup3 (2.48%)0000210000
IPR018253DnaJ domain, conserved site3 (2.48%)0000120000
IPR013027FAD-dependent pyridine nucleotide-disulphide oxidoreductase3 (2.48%)1000001001
IPR003441NAC domain3 (2.48%)0001001001
IPR023753Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain3 (2.48%)0000001002
IPR005162Retrotransposon gag domain3 (2.48%)0000003000
IPR002290Serine/threonine- / dual specificity protein kinase, catalytic domain3 (2.48%)0000120000
IPR008271Serine/threonine-protein kinase, active site3 (2.48%)0000120000
IPR001471AP2/ERF domain2 (1.65%)0000110000
IPR011006CheY-like superfamily2 (1.65%)0000001001
IPR008985Concanavalin A-like lectin/glucanases superfamily2 (1.65%)0000200000
IPR006476Conserved hypothetical protein CHP01589, plant2 (1.65%)0000200000
IPR016177DNA-binding domain2 (1.65%)0000110000
IPR000167Dehydrin2 (1.65%)0000000110
IPR005175Domain of unknown function DUF2962 (1.65%)0100010000
IPR019448EEIG1/EHBP1 N-terminal domain2 (1.65%)0001100000
IPR016156FAD/NAD-linked reductase, dimerisation domain2 (1.65%)0000001001
IPR000757Glycoside hydrolase, family 162 (1.65%)0000200000
IPR023214HAD-like domain2 (1.65%)0000100010
IPR001404Heat shock protein Hsp90 family2 (1.65%)0000200000
IPR020575Heat shock protein Hsp90, N-terminal2 (1.65%)0000200000
IPR019805Heat shock protein Hsp90, conserved site2 (1.65%)0000200000
IPR003594Histidine kinase-like ATPase, ATP-binding domain2 (1.65%)0000200000
IPR009057Homeodomain-like2 (1.65%)0001010000
IPR001752Kinesin, motor domain2 (1.65%)0000000002
IPR019821Kinesin, motor region, conserved site2 (1.65%)0000000002
IPR016196Major facilitator superfamily domain, general substrate transporter2 (1.65%)0000200000
IPR017877Myb-like domain2 (1.65%)0000200000
IPR016040NAD(P)-binding domain2 (1.65%)0010000001
IPR010658Nodulin-like2 (1.65%)0000200000
IPR012334Pectin lyase fold2 (1.65%)0000000002
IPR011050Pectin lyase fold/virulence factor2 (1.65%)0000000002
IPR006502Protein of unknown function DUF506, plant2 (1.65%)0000020000
IPR001327Pyridine nucleotide-disulphide oxidoreductase, NAD-binding domain2 (1.65%)0000001001
IPR020568Ribosomal protein S5 domain 2-type fold2 (1.65%)0000200000
IPR001789Signal transduction response regulator, receiver domain2 (1.65%)0000001001
IPR017887Transcription factor TCP subgroup2 (1.65%)0000000110
IPR005333Transcription factor, TCP2 (1.65%)0000000110
IPR003689Zinc/iron permease2 (1.65%)0000101000
IPR004698Zinc/iron permease, fungal/plant2 (1.65%)0000101000
IPR017956AT hook, DNA-binding motif1 (0.83%)0000010000
IPR013785Aldolase-type TIM barrel1 (0.83%)0000000001
IPR009051Alpha-helical ferredoxin1 (0.83%)0000000001
IPR018082AmbAllergen1 (0.83%)0000000001
IPR002110Ankyrin repeat1 (0.83%)0001000000
IPR020683Ankyrin repeat-containing domain1 (0.83%)0001000000
IPR027002Ankyrin repeat-containing protein At2g016801 (0.83%)0001000000
IPR003609Apple-like1 (0.83%)0000010000
IPR001461Aspartic peptidase1 (0.83%)0000000001
IPR021109Aspartic peptidase domain1 (0.83%)0000000001
IPR001969Aspartic peptidase, active site1 (0.83%)0000000001
IPR001480Bulb-type lectin domain1 (0.83%)0000010000
IPR024750Calcium-transporting P-type ATPase, N-terminal autoinhibitory domain1 (0.83%)0000100000
IPR006408Calcium-transporting P-type ATPase, subfamily IIB1 (0.83%)0000100000
IPR027001Caskin/Ankyrin repeat-containing protein1 (0.83%)0001000000
IPR001757Cation-transporting P-type ATPase1 (0.83%)0000100000
IPR006068Cation-transporting P-type ATPase, C-terminal1 (0.83%)0000100000
IPR004014Cation-transporting P-type ATPase, N-terminal1 (0.83%)0000100000
IPR000583Class II glutamine amidotransferase domain1 (0.83%)0000000001
IPR008972Cupredoxin1 (0.83%)0000000100
IPR004367Cyclin, C-terminal domain1 (0.83%)0000000001
IPR006671Cyclin, N-terminal1 (0.83%)0000000001
IPR013763Cyclin-like1 (0.83%)0000000001
IPR003657DNA-binding WRKY1 (0.83%)0000000010
IPR011545DNA/RNA helicase, DEAD/DEAH box type, N-terminal1 (0.83%)0100000000
IPR028261Dihydroprymidine dehydrogenase domain II1 (0.83%)0000000001
IPR000767Disease resistance protein1 (0.83%)0000000100
IPR006869Domain of unknown function DUF5471 (0.83%)0000000001
IPR008546Domain of unknown function DUF8281 (0.83%)0000001000
IPR005539ELK1 (0.83%)0001000000
IPR004342EXS, C-terminal1 (0.83%)0000001000
IPR015566Endoplasmin1 (0.83%)0000100000
IPR020946Flavin monooxygenase-like1 (0.83%)1000000000
IPR004993GH3 auxin-responsive promoter1 (0.83%)0000001000
IPR002347Glucose/ribitol dehydrogenase1 (0.83%)0010000000
IPR006005Glutamate synthase, NADH/NADPH, small subunit 11 (0.83%)0000000001
IPR002489Glutamate synthase, alpha subunit, C-terminal1 (0.83%)0000000001
IPR002932Glutamate synthase, central-C1 (0.83%)0000000001
IPR006982Glutamate synthase, central-N1 (0.83%)0000000001
IPR017932Glutamine amidotransferase type 2 domain1 (0.83%)0000000001
IPR000743Glycoside hydrolase, family 281 (0.83%)0000000001
IPR006379HAD-superfamily hydrolase, subfamily IIB1 (0.83%)0000000010
IPR010255Haem peroxidase1 (0.83%)0000010000
IPR002016Haem peroxidase, plant/fungal/bacterial1 (0.83%)0000010000
IPR001650Helicase, C-terminal1 (0.83%)0100000000
IPR014001Helicase, superfamily 1/2, ATP-binding domain1 (0.83%)0100000000
IPR025718Histone deacetylase complex subunit SAP30, Sin3 binding domain1 (0.83%)0000001000
IPR024145Histone deacetylase complex subunit SAP30/SAP30-like1 (0.83%)0000001000
IPR008422Homeobox KN domain1 (0.83%)0001000000
IPR001356Homeobox domain1 (0.83%)0001000000
IPR005540KNOX11 (0.83%)0001000000
IPR005541KNOX21 (0.83%)0001000000
IPR027640Kinesin-like protein1 (0.83%)0000000001
IPR001611Leucine-rich repeat1 (0.83%)0000100000
IPR003591Leucine-rich repeat, typical subtype1 (0.83%)0000100000
IPR013210Leucine-rich repeat-containing N-terminal, type 21 (0.83%)0000100000
IPR005979Light-dependent protochlorophyllide reductase1 (0.83%)0010000000
IPR025756MYB-CC type transcription factor, LHEQLE-containing domain1 (0.83%)0000010000
IPR001708Membrane insertase OXA1/ALB3/YidC1 (0.83%)0000010000
IPR028055Membrane insertase YidC/Oxa1, C-terminal1 (0.83%)0000010000
IPR003527Mitogen-activated protein (MAP) kinase, conserved site1 (0.83%)0000010000
IPR001117Multicopper oxidase, type 11 (0.83%)0000000100
IPR011706Multicopper oxidase, type 21 (0.83%)0000000100
IPR011707Multicopper oxidase, type 31 (0.83%)0000000100
IPR017930Myb domain1 (0.83%)0000010000
IPR006447Myb domain, plants1 (0.83%)0000010000
IPR002182NB-ARC1 (0.83%)0000000100
IPR012677Nucleotide-binding, alpha-beta plait1 (0.83%)0100000000
IPR023298P-type ATPase, transmembrane domain1 (0.83%)0000100000
IPR008250P-type ATPase, A domain1 (0.83%)0000100000
IPR023299P-type ATPase, cytoplasmic domain N1 (0.83%)0000100000
IPR018303P-type ATPase, phosphorylation site1 (0.83%)0000100000
IPR013227PAN-2 domain1 (0.83%)0000010000
IPR026961PGG domain1 (0.83%)0001000000
IPR002022Pectate lyase/Amb allergen1 (0.83%)0000000001
IPR019794Peroxidase, active site1 (0.83%)0000010000
IPR019793Peroxidases heam-ligand binding site1 (0.83%)0000010000
IPR008796Photosystem I PsaN, reaction centre subunit N1 (0.83%)0000001000
IPR003687Photosystem II PsbK1 (0.83%)0000100000
IPR000823Plant peroxidase1 (0.83%)0000010000
IPR013666Pleckstrin-like, plant1 (0.83%)0000001000
IPR025322Protein of unknown function DUF4228, plant1 (0.83%)0010000000
IPR007650Protein of unknown function DUF5811 (0.83%)0001000000
IPR006873Protein of unknown function DUF6201 (0.83%)0000000001
IPR008586Protein of unknown function DUF868, plant1 (0.83%)0000100000
IPR000103Pyridine nucleotide-disulphide oxidoreductase, class-II1 (0.83%)1000000000
IPR004099Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain1 (0.83%)0000001000
IPR000629RNA helicase, ATP-dependent, DEAD-box, conserved site1 (0.83%)0100000000
IPR014014RNA helicase, DEAD-box type, Q motif1 (0.83%)0100000000
IPR000504RNA recognition motif domain1 (0.83%)0100000000
IPR000858S-locus glycoprotein1 (0.83%)0000010000
IPR021820S-locus receptor kinase, C-terminal1 (0.83%)0000010000
IPR001005SANT/Myb domain1 (0.83%)0000010000
IPR001214SET domain1 (0.83%)0000000001
IPR004331SPX, N-terminal1 (0.83%)0000001000
IPR003369Sec-independent protein translocase protein TatA/B/E1 (0.83%)0000001000
IPR006312Sec-independent protein translocase protein TatA/E1 (0.83%)0000001000
IPR001245Serine-threonine/tyrosine-protein kinase catalytic domain1 (0.83%)0000010000
IPR002198Short-chain dehydrogenase/reductase SDR1 (0.83%)0010000000
IPR025757Ternary complex factor MIP1, leucine-zipper1 (0.83%)0000000001
IPR021410The fantastic four family1 (0.83%)0000010000
IPR003337Trehalose-phosphatase1 (0.83%)0000000010
IPR003998Twin-arginine translocation protein TatB-like1 (0.83%)0000001000
IPR010713Xyloglucan endo-transglycosylase, C-terminal1 (0.83%)0000100000
IPR013087Zinc finger C2H2-type/integrase DNA-binding domain1 (0.83%)0000000001
IPR000315Zinc finger, B-box1 (0.83%)0010000000
IPR007087Zinc finger, C2H21 (0.83%)0000000001
IPR015880Zinc finger, C2H2-like1 (0.83%)0000000001
IPR001841Zinc finger, RING-type1 (0.83%)0000000001
IPR013083Zinc finger, RING/FYVE/PHD-type1 (0.83%)0000000001