Binding site page : Motif_540


Identifier
Motif_540
Name
CCA1 motif1 BS in CAB1
Description
A myb-related transcription factor is involved in the phytochrome regulation of an Arabidopsis Lhcb gene
Number of genes
41
Sequence
AAACAATCTA
Positional Weight Matrix

Binding site distribution per species

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Binding site distribition per location

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Associated Transcription Factors

Transcription factor Alias Description Orthologs Associated motifs
AT2G46830circadian clock associated 1P92973;AtCCA1View orthologsView associated binding sites

Gene List

Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 41 total, starting on record 1, ending on 20

gene_id species strand chr type
GM15G16730 gma - Gm15 coding
GM05G24570 gma - Gm05 coding
GM16G04150 gma - Gm16 coding
GM19G29300 gma + Gm19 coding
GM19G29350 gma + Gm19 coding
GM08G39930 gma + Gm08 coding
GM17G06871 gma + Gm17 coding
GM05G04750 gma + Gm05 coding
PPE_007G15510 ppe - scaffold_7 coding
PPE_001G00200 ppe + scaffold_1 coding
PPE_001G13910 ppe - scaffold_1 coding
PPE_006G04330 ppe - scaffold_6 coding
PPE_004G08100 ppe + scaffold_4 coding
PPE_007G08900 ppe + scaffold_7 coding
PPE_007G23790 ppe + scaffold_7 coding
PPE_001G02360 ppe + scaffold_1 coding
AT1G22530 ath - 1 coding
AT1G73600 ath + 1 coding
AT5G67020 ath + 5 coding
AT4G14800 ath + 4 coding

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