Gene Ontology terms associated with a binding site

Binding site
Motif_540
Name
CCA1 motif1 BS in CAB1
Description
A myb-related transcription factor is involved in the phytochrome regulation of an Arabidopsis Lhcb gene
#Associated genes
41
#Associated GO terms
589
 
Biological Process
Molecular Function
Cellular Component






Molecular Function (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005488binding18 (43.90%)1220372001
GO:0003824catalytic activity15 (36.59%)2210412003
GO:0005515protein binding9 (21.95%)1000232001
GO:1901363heterocyclic compound binding8 (19.51%)0110060000
GO:0097159organic cyclic compound binding8 (19.51%)0110060000
GO:0003676nucleic acid binding7 (17.07%)0100060000
GO:0003677DNA binding6 (14.63%)0000060000
GO:0043167ion binding6 (14.63%)0210021000
GO:0043169cation binding5 (12.20%)0110021000
GO:0016787hydrolase activity5 (12.20%)1100101001
GO:0046872metal ion binding5 (12.20%)0110021000
GO:0016740transferase activity5 (12.20%)1000110002
GO:0046914transition metal ion binding5 (12.20%)0110021000
GO:0001071nucleic acid binding transcription factor activity4 (9.76%)0000040000
GO:0016491oxidoreductase activity4 (9.76%)0010300000
GO:0043565sequence-specific DNA binding4 (9.76%)0000040000
GO:0003700sequence-specific DNA binding transcription factor activity4 (9.76%)0000040000
GO:0047800cysteamine dioxygenase activity3 (7.32%)0000300000
GO:0051213dioxygenase activity3 (7.32%)0000300000
GO:0016701oxidoreductase activity, acting on single donors with incorporation of molecular oxygen3 (7.32%)0000300000
GO:0016702oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen3 (7.32%)0000300000
GO:0008270zinc ion binding3 (7.32%)0000021000
GO:00800663-methylthiopropyl-desulfoglucosinolate sulfotransferase activity2 (4.88%)0000010001
GO:00800674-methylthiobutyl-desulfoglucosinolate sulfotransferase activity2 (4.88%)0000010001
GO:00800685-methylthiopentyl-desulfoglucosinolate sulfotransferase activity2 (4.88%)0000010001
GO:00800697-methylthioheptyl-desulfoglucosinolate sulfotransferase activity2 (4.88%)0000010001
GO:00800708-methylthiooctyl-desulfoglucosinolate sulfotransferase activity2 (4.88%)0000010001
GO:0047364desulfoglucosinolate sulfotransferase activity2 (4.88%)0000010001
GO:0016788hydrolase activity, acting on ester bonds2 (4.88%)0000001001
GO:0080071indol-3-yl-methyl-desulfoglucosinolate sulfotransferase activity2 (4.88%)0000010001
GO:0060089molecular transducer activity2 (4.88%)0000001001
GO:0046983protein dimerization activity2 (4.88%)0000020000
GO:0004871signal transducer activity2 (4.88%)0000001001
GO:0003735structural constituent of ribosome2 (4.88%)0001100000
GO:0005198structural molecule activity2 (4.88%)0001100000
GO:0008146sulfotransferase activity2 (4.88%)0000010001
GO:0016741transferase activity, transferring one-carbon groups2 (4.88%)1000100000
GO:0016782transferase activity, transferring sulfur-containing groups2 (4.88%)0000010001
GO:0005215transporter activity2 (4.88%)1000100000
GO:0005524ATP binding1 (2.44%)0100000000
GO:0008170N-methyltransferase activity1 (2.44%)1000000000
GO:0008757S-adenosylmethionine-dependent methyltransferase activity1 (2.44%)1000000000
GO:0003779actin binding1 (2.44%)0000100000
GO:0051015actin filament binding1 (2.44%)0000100000
GO:0004013adenosylhomocysteinase activity1 (2.44%)0100000000
GO:0030554adenyl nucleotide binding1 (2.44%)0100000000
GO:0032559adenyl ribonucleotide binding1 (2.44%)0100000000
GO:0016832aldehyde-lyase activity1 (2.44%)0000001000
GO:0004812aminoacyl-tRNA ligase activity1 (2.44%)0100000000
GO:0043168anion binding1 (2.44%)0100000000
GO:0004816asparagine-tRNA ligase activity1 (2.44%)0100000000
GO:0019187beta-1,4-mannosyltransferase activity1 (2.44%)0000000001
GO:0097367carbohydrate derivative binding1 (2.44%)0100000000
GO:0016830carbon-carbon lyase activity1 (2.44%)0000001000
GO:0052689carboxylic ester hydrolase activity1 (2.44%)0000001000
GO:0051087chaperone binding1 (2.44%)0000010000
GO:0005507copper ion binding1 (2.44%)0100000000
GO:0008092cytoskeletal protein binding1 (2.44%)0000100000
GO:0004175endopeptidase activity1 (2.44%)1000000000
GO:0019899enzyme binding1 (2.44%)1000000000
GO:0004857enzyme inhibitor activity1 (2.44%)0000001000
GO:0030234enzyme regulator activity1 (2.44%)0000001000
GO:0008864formyltetrahydrofolate deformylase activity1 (2.44%)0000100000
GO:0004332fructose-bisphosphate aldolase activity1 (2.44%)0000001000
GO:0020037heme binding1 (2.44%)0010000000
GO:0016810hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds1 (2.44%)0000100000
GO:0016811hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides1 (2.44%)0000100000
GO:0016801hydrolase activity, acting on ether bonds1 (2.44%)0100000000
GO:0016742hydroxymethyl-, formyl- and related transferase activity1 (2.44%)0000100000
GO:0005506iron ion binding1 (2.44%)0010000000
GO:0016874ligase activity1 (2.44%)0100000000
GO:0016876ligase activity, forming aminoacyl-tRNA and related compounds1 (2.44%)0100000000
GO:0016875ligase activity, forming carbon-oxygen bonds1 (2.44%)0100000000
GO:0008289lipid binding1 (2.44%)1000000000
GO:0016829lyase activity1 (2.44%)0000001000
GO:0051753mannan synthase activity1 (2.44%)0000000001
GO:0000030mannosyltransferase activity1 (2.44%)0000000001
GO:0008168methyltransferase activity1 (2.44%)1000000000
GO:0004497monooxygenase activity1 (2.44%)0010000000
GO:0001882nucleoside binding1 (2.44%)0100000000
GO:1901265nucleoside phosphate binding1 (2.44%)0100000000
GO:0000166nucleotide binding1 (2.44%)0100000000
GO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen1 (2.44%)0010000000
GO:0030599pectinesterase activity1 (2.44%)0000001000
GO:0008233peptidase activity1 (2.44%)1000000000
GO:0070011peptidase activity, acting on L-amino acid peptides1 (2.44%)1000000000
GO:0016791phosphatase activity1 (2.44%)0000000001
GO:0000234phosphoethanolamine N-methyltransferase activity1 (2.44%)1000000000
GO:0004721phosphoprotein phosphatase activity1 (2.44%)0000000001
GO:0042578phosphoric ester hydrolase activity1 (2.44%)0000000001
GO:0002020protease binding1 (2.44%)1000000000
GO:0032403protein complex binding1 (2.44%)0000100000
GO:0004722protein serine/threonine phosphatase activity1 (2.44%)0000000001
GO:0008565protein transporter activity1 (2.44%)0000100000
GO:0001883purine nucleoside binding1 (2.44%)0100000000
GO:0017076purine nucleotide binding1 (2.44%)0100000000
GO:0032550purine ribonucleoside binding1 (2.44%)0100000000
GO:0035639purine ribonucleoside triphosphate binding1 (2.44%)0100000000
GO:0032555purine ribonucleotide binding1 (2.44%)0100000000
GO:0032549ribonucleoside binding1 (2.44%)0100000000
GO:0032553ribonucleotide binding1 (2.44%)0100000000
GO:0036094small molecule binding1 (2.44%)0100000000
GO:0022892substrate-specific transporter activity1 (2.44%)0000100000
GO:0046906tetrapyrrole binding1 (2.44%)0010000000
GO:0004298threonine-type endopeptidase activity1 (2.44%)1000000000
GO:0070003threonine-type peptidase activity1 (2.44%)1000000000
GO:0016757transferase activity, transferring glycosyl groups1 (2.44%)0000000001
GO:0016758transferase activity, transferring hexosyl groups1 (2.44%)0000000001
GO:0016802trialkylsulfonium hydrolase activity1 (2.44%)0100000000

Biological Process (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0009987cellular process25 (60.98%)3211483003
GO:0008152metabolic process23 (56.10%)2211572003
GO:0044699single-organism process22 (53.66%)2210672002
GO:0044237cellular metabolic process20 (48.78%)2211272003
GO:0071704organic substance metabolic process20 (48.78%)2211272003
GO:0009058biosynthetic process17 (41.46%)1211271002
GO:0044249cellular biosynthetic process17 (41.46%)1211271002
GO:1901576organic substance biosynthetic process17 (41.46%)1211271002
GO:0044238primary metabolic process17 (41.46%)2201262002
GO:0044260cellular macromolecule metabolic process15 (36.59%)2201161002
GO:0043170macromolecule metabolic process15 (36.59%)2201161002
GO:0044763single-organism cellular process14 (34.15%)2210322002
GO:0034645cellular macromolecule biosynthetic process13 (31.71%)1201161001
GO:0009059macromolecule biosynthetic process13 (31.71%)1201161001
GO:0034641cellular nitrogen compound metabolic process12 (29.27%)1210161000
GO:0006807nitrogen compound metabolic process12 (29.27%)1210161000
GO:0006725cellular aromatic compound metabolic process11 (26.83%)0210161000
GO:0046483heterocycle metabolic process11 (26.83%)0210161000
GO:1901360organic cyclic compound metabolic process11 (26.83%)0210161000
GO:0044710single-organism metabolic process11 (26.83%)1210411001
GO:0010467gene expression10 (24.39%)0201160000
GO:0006139nucleobase-containing compound metabolic process10 (24.39%)0200161000
GO:0050896response to stimulus10 (24.39%)1020122002
GO:0019438aromatic compound biosynthetic process9 (21.95%)0110160000
GO:0065007biological regulation9 (21.95%)0100061001
GO:0044271cellular nitrogen compound biosynthetic process9 (21.95%)0110160000
GO:0032502developmental process9 (21.95%)1100141001
GO:0018130heterocycle biosynthetic process9 (21.95%)0110160000
GO:0032501multicellular organismal process9 (21.95%)1100141001
GO:1901362organic cyclic compound biosynthetic process9 (21.95%)0110160000
GO:0050789regulation of biological process9 (21.95%)0100061001
GO:0050794regulation of cellular process9 (21.95%)0100061001
GO:0044767single-organism developmental process9 (21.95%)1100141001
GO:0016070RNA metabolic process8 (19.51%)0200060000
GO:0007275multicellular organismal development8 (19.51%)0100141001
GO:0090304nucleic acid metabolic process8 (19.51%)0200060000
GO:0034654nucleobase-containing compound biosynthetic process8 (19.51%)0100160000
GO:0044707single-multicellular organism process8 (19.51%)0100141001
GO:0032774RNA biosynthetic process7 (17.07%)0100060000
GO:0048856anatomical structure development7 (17.07%)1100121001
GO:0044267cellular protein metabolic process7 (17.07%)1101101002
GO:0051179localization7 (17.07%)1010211001
GO:0019538protein metabolic process7 (17.07%)1101101002
GO:2001141regulation of RNA biosynthetic process7 (17.07%)0100060000
GO:0051252regulation of RNA metabolic process7 (17.07%)0100060000
GO:0009889regulation of biosynthetic process7 (17.07%)0100060000
GO:0031326regulation of cellular biosynthetic process7 (17.07%)0100060000
GO:2000112regulation of cellular macromolecule biosynthetic process7 (17.07%)0100060000
GO:0031323regulation of cellular metabolic process7 (17.07%)0100060000
GO:0010468regulation of gene expression7 (17.07%)0100060000
GO:0010556regulation of macromolecule biosynthetic process7 (17.07%)0100060000
GO:0060255regulation of macromolecule metabolic process7 (17.07%)0100060000
GO:0019222regulation of metabolic process7 (17.07%)0100060000
GO:0051171regulation of nitrogen compound metabolic process7 (17.07%)0100060000
GO:0019219regulation of nucleobase-containing compound metabolic process7 (17.07%)0100060000
GO:0080090regulation of primary metabolic process7 (17.07%)0100060000
GO:0006355regulation of transcription, DNA-dependent7 (17.07%)0100060000
GO:0006351transcription, DNA-templated7 (17.07%)0100060000
GO:0016043cellular component organization6 (14.63%)2110101000
GO:0071840cellular component organization or biogenesis6 (14.63%)2110101000
GO:0051234establishment of localization6 (14.63%)1000211001
GO:0006950response to stress6 (14.63%)1020002001
GO:0044281small molecule metabolic process6 (14.63%)1210101000
GO:0048731system development6 (14.63%)0100121001
GO:0006810transport6 (14.63%)1000211001
GO:0048513organ development5 (12.20%)0000121001
GO:1901564organonitrogen compound metabolic process5 (12.20%)1110101000
GO:0055114oxidation-reduction process5 (12.20%)0010301000
GO:0009791post-embryonic development5 (12.20%)0100021001
GO:0009628response to abiotic stimulus5 (12.20%)0020021000
GO:0042221response to chemical5 (12.20%)1020100001
GO:0044711single-organism biosynthetic process5 (12.20%)1010110001
GO:0009653anatomical structure morphogenesis4 (9.76%)1000120000
GO:1901137carbohydrate derivative biosynthetic process4 (9.76%)0010110001
GO:1901135carbohydrate derivative metabolic process4 (9.76%)0010110001
GO:0051704multi-organism process4 (9.76%)1010001001
GO:0006796phosphate-containing compound metabolic process4 (9.76%)1000101001
GO:0006793phosphorus metabolic process4 (9.76%)1000101001
GO:0010033response to organic substance4 (9.76%)1010100001
GO:0009845seed germination4 (9.76%)0000021001
GO:0090351seedling development4 (9.76%)0000021001
GO:0016144S-glycoside biosynthetic process3 (7.32%)0010010001
GO:0016143S-glycoside metabolic process3 (7.32%)0010010001
GO:0051641cellular localization3 (7.32%)0010200000
GO:0006464cellular protein modification process3 (7.32%)0000001002
GO:0051716cellular response to stimulus3 (7.32%)0010001001
GO:0006952defense response3 (7.32%)0010001001
GO:0050832defense response to fungus3 (7.32%)0010001001
GO:0098542defense response to other organism3 (7.32%)0010001001
GO:0019761glucosinolate biosynthetic process3 (7.32%)0010010001
GO:0019760glucosinolate metabolic process3 (7.32%)0010010001
GO:0019758glycosinolate biosynthetic process3 (7.32%)0010010001
GO:0019757glycosinolate metabolic process3 (7.32%)0010010001
GO:1901659glycosyl compound biosynthetic process3 (7.32%)0010010001
GO:1901657glycosyl compound metabolic process3 (7.32%)0010010001
GO:0006955immune response3 (7.32%)0010001001
GO:0002376immune system process3 (7.32%)0010001001
GO:0045087innate immune response3 (7.32%)0010001001
GO:0043412macromolecule modification3 (7.32%)0000001002
GO:0006082organic acid metabolic process3 (7.32%)0110100000
GO:1901566organonitrogen compound biosynthetic process3 (7.32%)1010100000
GO:0019637organophosphate metabolic process3 (7.32%)1000101000
GO:0043436oxoacid metabolic process3 (7.32%)0110100000
GO:0036211protein modification process3 (7.32%)0000001002
GO:0009607response to biotic stimulus3 (7.32%)0010001001
GO:0009719response to endogenous stimulus3 (7.32%)0010100001
GO:0009620response to fungus3 (7.32%)0010001001
GO:0009725response to hormone3 (7.32%)0010100001
GO:0051707response to other organism3 (7.32%)0010001001
GO:0048364root development3 (7.32%)0000101001
GO:0022622root system development3 (7.32%)0000101001
GO:0019748secondary metabolic process3 (7.32%)0010010001
GO:0044550secondary metabolite biosynthetic process3 (7.32%)0010010001
GO:0044765single-organism transport3 (7.32%)0000011001
GO:0044272sulfur compound biosynthetic process3 (7.32%)0010010001
GO:0006790sulfur compound metabolic process3 (7.32%)0010010001
GO:0006412translation3 (7.32%)0101100000
GO:0007186G-protein coupled receptor signaling pathway2 (4.88%)0000001001
GO:0010541acropetal auxin transport2 (4.88%)0000001001
GO:0009926auxin polar transport2 (4.88%)0000001001
GO:0060918auxin transport2 (4.88%)0000001001
GO:0010540basipetal auxin transport2 (4.88%)0000001001
GO:0005975carbohydrate metabolic process2 (4.88%)1000001000
GO:0019752carboxylic acid metabolic process2 (4.88%)0100100000
GO:0009056catabolic process2 (4.88%)1000001000
GO:0007154cell communication2 (4.88%)0000001001
GO:0048468cell development2 (4.88%)1000100000
GO:0030154cell differentiation2 (4.88%)1000100000
GO:0016049cell growth2 (4.88%)1000100000
GO:0007166cell surface receptor signaling pathway2 (4.88%)0000001001
GO:0042545cell wall modification2 (4.88%)0010001000
GO:0071555cell wall organization2 (4.88%)0010001000
GO:0071554cell wall organization or biogenesis2 (4.88%)0010001000
GO:0006520cellular amino acid metabolic process2 (4.88%)0100100000
GO:0048869cellular developmental process2 (4.88%)1000100000
GO:0070727cellular macromolecule localization2 (4.88%)0010100000
GO:0006732coenzyme metabolic process2 (4.88%)0000101000
GO:0051186cofactor metabolic process2 (4.88%)0000101000
GO:0009817defense response to fungus, incompatible interaction2 (4.88%)0000001001
GO:0009814defense response, incompatible interaction2 (4.88%)0000001001
GO:0048588developmental cell growth2 (4.88%)1000100000
GO:0048589developmental growth2 (4.88%)1000100000
GO:0060560developmental growth involved in morphogenesis2 (4.88%)1000100000
GO:0003006developmental process involved in reproduction2 (4.88%)1100000000
GO:0051649establishment of localization in cell2 (4.88%)0000200000
GO:0045229external encapsulating structure organization2 (4.88%)0010001000
GO:0040007growth2 (4.88%)1000100000
GO:0009914hormone transport2 (4.88%)0000001001
GO:0046907intracellular transport2 (4.88%)0000200000
GO:0048527lateral root development2 (4.88%)0000001001
GO:0048366leaf development2 (4.88%)0000020000
GO:0009965leaf morphogenesis2 (4.88%)0000020000
GO:0042158lipoprotein biosynthetic process2 (4.88%)0000001001
GO:0042157lipoprotein metabolic process2 (4.88%)0000001001
GO:0043933macromolecular complex subunit organization2 (4.88%)1000100000
GO:0033036macromolecule localization2 (4.88%)0010100000
GO:0055086nucleobase-containing small molecule metabolic process2 (4.88%)0000101000
GO:0006753nucleoside phosphate metabolic process2 (4.88%)0000101000
GO:0009117nucleotide metabolic process2 (4.88%)0000101000
GO:0009887organ morphogenesis2 (4.88%)0000020000
GO:0006996organelle organization2 (4.88%)0100100000
GO:1901575organic substance catabolic process2 (4.88%)1000001000
GO:0090407organophosphate biosynthetic process2 (4.88%)1000100000
GO:0048827phyllome development2 (4.88%)0000020000
GO:0048569post-embryonic organ development2 (4.88%)0000001001
GO:0048528post-embryonic root development2 (4.88%)0000001001
GO:0097354prenylation2 (4.88%)0000001001
GO:0043543protein acylation2 (4.88%)0000001001
GO:0071822protein complex subunit organization2 (4.88%)1000100000
GO:0006497protein lipidation2 (4.88%)0000001001
GO:0018345protein palmitoylation2 (4.88%)0000001001
GO:0018342protein prenylation2 (4.88%)0000001001
GO:0065008regulation of biological quality2 (4.88%)0000001001
GO:0010817regulation of hormone levels2 (4.88%)0000001001
GO:0000003reproduction2 (4.88%)1100000000
GO:0022414reproductive process2 (4.88%)1100000000
GO:0009737response to abscisic acid2 (4.88%)0000100001
GO:0097305response to alcohol2 (4.88%)0000100001
GO:0036293response to decreased oxygen levels2 (4.88%)0010001000
GO:0001666response to hypoxia2 (4.88%)0010001000
GO:0009416response to light stimulus2 (4.88%)0000020000
GO:0033993response to lipid2 (4.88%)0000100001
GO:0070482response to oxygen levels2 (4.88%)0010001000
GO:1901700response to oxygen-containing compound2 (4.88%)0000100001
GO:0009314response to radiation2 (4.88%)0000020000
GO:0009639response to red or far red light2 (4.88%)0000020000
GO:0048367shoot system development2 (4.88%)0000020000
GO:0010016shoot system morphogenesis2 (4.88%)0000020000
GO:0007165signal transduction2 (4.88%)0000001001
GO:0023052signaling2 (4.88%)0000001001
GO:0044702single organism reproductive process2 (4.88%)1100000000
GO:0044700single organism signaling2 (4.88%)0000001001
GO:0044723single-organism carbohydrate metabolic process2 (4.88%)1000001000
GO:0006189'de novo' IMP biosynthetic process1 (2.44%)0000100000
GO:0006188IMP biosynthetic process1 (2.44%)0000100000
GO:0046040IMP metabolic process1 (2.44%)0000100000
GO:0006739NADP metabolic process1 (2.44%)0000001000
GO:0006740NADPH regeneration1 (2.44%)0000001000
GO:0051764actin crosslink formation1 (2.44%)0000100000
GO:0030036actin cytoskeleton organization1 (2.44%)0000100000
GO:0030042actin filament depolymerization1 (2.44%)0000100000
GO:0007015actin filament organization1 (2.44%)0000100000
GO:0051014actin filament severing1 (2.44%)0000100000
GO:0030029actin filament-based process1 (2.44%)0000100000
GO:0008154actin polymerization or depolymerization1 (2.44%)0000100000
GO:0046165alcohol biosynthetic process1 (2.44%)1000000000
GO:0006066alcohol metabolic process1 (2.44%)1000000000
GO:1901605alpha-amino acid metabolic process1 (2.44%)0000100000
GO:0009308amine metabolic process1 (2.44%)1000000000
GO:0043038amino acid activation1 (2.44%)0100000000
GO:0006915apoptotic process1 (2.44%)0000010000
GO:0006421asparaginyl-tRNA aminoacylation1 (2.44%)0100000000
GO:0052543callose deposition in cell wall1 (2.44%)0010000000
GO:0052545callose localization1 (2.44%)0010000000
GO:0016051carbohydrate biosynthetic process1 (2.44%)1000000000
GO:0016052carbohydrate catabolic process1 (2.44%)0000001000
GO:0007049cell cycle1 (2.44%)1000000000
GO:0008219cell death1 (2.44%)0000010000
GO:0051301cell division1 (2.44%)1000000000
GO:0048469cell maturation1 (2.44%)0000100000
GO:0000902cell morphogenesis1 (2.44%)1000000000
GO:0000904cell morphogenesis involved in differentiation1 (2.44%)1000000000
GO:0009932cell tip growth1 (2.44%)1000000000
GO:0052386cell wall thickening1 (2.44%)0010000000
GO:0044106cellular amine metabolic process1 (2.44%)1000000000
GO:0006576cellular biogenic amine metabolic process1 (2.44%)1000000000
GO:0034637cellular carbohydrate biosynthetic process1 (2.44%)1000000000
GO:0044262cellular carbohydrate metabolic process1 (2.44%)1000000000
GO:0044248cellular catabolic process1 (2.44%)1000000000
GO:0022607cellular component assembly1 (2.44%)1000000000
GO:0044085cellular component biogenesis1 (2.44%)1000000000
GO:0022411cellular component disassembly1 (2.44%)0000100000
GO:0032989cellular component morphogenesis1 (2.44%)1000000000
GO:0006073cellular glucan metabolic process1 (2.44%)1000000000
GO:0044255cellular lipid metabolic process1 (2.44%)1000000000
GO:0034622cellular macromolecular complex assembly1 (2.44%)1000000000
GO:0044265cellular macromolecule catabolic process1 (2.44%)1000000000
GO:0043094cellular metabolic compound salvage1 (2.44%)0000100000
GO:0006575cellular modified amino acid metabolic process1 (2.44%)0000100000
GO:0033692cellular polysaccharide biosynthetic process1 (2.44%)1000000000
GO:0044264cellular polysaccharide metabolic process1 (2.44%)1000000000
GO:0048610cellular process involved in reproduction1 (2.44%)1000000000
GO:0044257cellular protein catabolic process1 (2.44%)1000000000
GO:0043623cellular protein complex assembly1 (2.44%)1000000000
GO:0043624cellular protein complex disassembly1 (2.44%)0000100000
GO:0034613cellular protein localization1 (2.44%)0000100000
GO:0070887cellular response to chemical stimulus1 (2.44%)0010000000
GO:0036294cellular response to decreased oxygen levels1 (2.44%)0010000000
GO:0071456cellular response to hypoxia1 (2.44%)0010000000
GO:0071453cellular response to oxygen levels1 (2.44%)0010000000
GO:0033554cellular response to stress1 (2.44%)0010000000
GO:0016568chromatin modification1 (2.44%)0100000000
GO:0006325chromatin organization1 (2.44%)0100000000
GO:0006342chromatin silencing1 (2.44%)0100000000
GO:0051276chromosome organization1 (2.44%)0100000000
GO:0016569covalent chromatin modification1 (2.44%)0100000000
GO:0016482cytoplasmic transport1 (2.44%)0000100000
GO:0007010cytoskeleton organization1 (2.44%)0000100000
GO:0016265death1 (2.44%)0000010000
GO:0052542defense response by callose deposition1 (2.44%)0010000000
GO:0052544defense response by callose deposition in cell wall1 (2.44%)0010000000
GO:0052482defense response by cell wall thickening1 (2.44%)0010000000
GO:0042742defense response to bacterium1 (2.44%)0010000000
GO:0002213defense response to insect1 (2.44%)0010000000
GO:0016311dephosphorylation1 (2.44%)0000000001
GO:0021700developmental maturation1 (2.44%)0000100000
GO:0005984disaccharide metabolic process1 (2.44%)1000000000
GO:0009790embryo development1 (2.44%)0100000000
GO:0009793embryo development ending in seed dormancy1 (2.44%)0100000000
GO:0009913epidermal cell differentiation1 (2.44%)0000100000
GO:0008544epidermis development1 (2.44%)0000100000
GO:0030855epithelial cell differentiation1 (2.44%)0000100000
GO:0060429epithelium development1 (2.44%)0000100000
GO:0045184establishment of protein localization1 (2.44%)0000100000
GO:0042439ethanolamine-containing compound metabolic process1 (2.44%)1000000000
GO:0006760folic acid-containing compound metabolic process1 (2.44%)0000100000
GO:0010154fruit development1 (2.44%)0100000000
GO:0016458gene silencing1 (2.44%)0100000000
GO:0006091generation of precursor metabolites and energy1 (2.44%)0000001000
GO:0009250glucan biosynthetic process1 (2.44%)1000000000
GO:0044042glucan metabolic process1 (2.44%)1000000000
GO:0006007glucose catabolic process1 (2.44%)0000001000
GO:0006006glucose metabolic process1 (2.44%)0000001000
GO:0045017glycerolipid biosynthetic process1 (2.44%)1000000000
GO:0046486glycerolipid metabolic process1 (2.44%)1000000000
GO:0046474glycerophospholipid biosynthetic process1 (2.44%)1000000000
GO:0006650glycerophospholipid metabolic process1 (2.44%)1000000000
GO:0006096glycolysis1 (2.44%)0000001000
GO:0019320hexose catabolic process1 (2.44%)0000001000
GO:0019318hexose metabolic process1 (2.44%)0000001000
GO:0009759indole glucosinolate biosynthetic process1 (2.44%)0010000000
GO:0042343indole glucosinolate metabolic process1 (2.44%)0010000000
GO:0042435indole-containing compound biosynthetic process1 (2.44%)0010000000
GO:0042430indole-containing compound metabolic process1 (2.44%)0010000000
GO:0009682induced systemic resistance1 (2.44%)0010000000
GO:0006886intracellular protein transport1 (2.44%)0000100000
GO:0008610lipid biosynthetic process1 (2.44%)1000000000
GO:0006629lipid metabolic process1 (2.44%)1000000000
GO:0065003macromolecular complex assembly1 (2.44%)1000000000
GO:0032984macromolecular complex disassembly1 (2.44%)0000100000
GO:0009057macromolecule catabolic process1 (2.44%)1000000000
GO:0000023maltose metabolic process1 (2.44%)1000000000
GO:0006346methylation-dependent chromatin silencing1 (2.44%)0100000000
GO:0043632modification-dependent macromolecule catabolic process1 (2.44%)1000000000
GO:0019941modification-dependent protein catabolic process1 (2.44%)1000000000
GO:0046365monosaccharide catabolic process1 (2.44%)0000001000
GO:0005996monosaccharide metabolic process1 (2.44%)0000001000
GO:0044706multi-multicellular organism process1 (2.44%)1000000000
GO:0044703multi-organism reproductive process1 (2.44%)1000000000
GO:0034660ncRNA metabolic process1 (2.44%)0100000000
GO:0051253negative regulation of RNA metabolic process1 (2.44%)0100000000
GO:0048519negative regulation of biological process1 (2.44%)0100000000
GO:0009890negative regulation of biosynthetic process1 (2.44%)0100000000
GO:0031327negative regulation of cellular biosynthetic process1 (2.44%)0100000000
GO:2000113negative regulation of cellular macromolecule biosynthetic process1 (2.44%)0100000000
GO:0031324negative regulation of cellular metabolic process1 (2.44%)0100000000
GO:0048523negative regulation of cellular process1 (2.44%)0100000000
GO:0010629negative regulation of gene expression1 (2.44%)0100000000
GO:0045814negative regulation of gene expression, epigenetic1 (2.44%)0100000000
GO:0010558negative regulation of macromolecule biosynthetic process1 (2.44%)0100000000
GO:0010605negative regulation of macromolecule metabolic process1 (2.44%)0100000000
GO:0009892negative regulation of metabolic process1 (2.44%)0100000000
GO:0051172negative regulation of nitrogen compound metabolic process1 (2.44%)0100000000
GO:0045934negative regulation of nucleobase-containing compound metabolic process1 (2.44%)0100000000
GO:0045892negative regulation of transcription, DNA-dependent1 (2.44%)0100000000
GO:0046496nicotinamide nucleotide metabolic process1 (2.44%)0000001000
GO:0009124nucleoside monophosphate biosynthetic process1 (2.44%)0000100000
GO:0009123nucleoside monophosphate metabolic process1 (2.44%)0000100000
GO:1901293nucleoside phosphate biosynthetic process1 (2.44%)0000100000
GO:0009165nucleotide biosynthetic process1 (2.44%)0000100000
GO:0009311oligosaccharide metabolic process1 (2.44%)1000000000
GO:0006730one-carbon metabolic process1 (2.44%)0100000000
GO:1901617organic hydroxy compound biosynthetic process1 (2.44%)1000000000
GO:1901615organic hydroxy compound metabolic process1 (2.44%)1000000000
GO:0071702organic substance transport1 (2.44%)0000100000
GO:0006733oxidoreduction coenzyme metabolic process1 (2.44%)0000001000
GO:0006098pentose-phosphate shunt1 (2.44%)0000001000
GO:0006656phosphatidylcholine biosynthetic process1 (2.44%)1000000000
GO:0046470phosphatidylcholine metabolic process1 (2.44%)1000000000
GO:0008654phospholipid biosynthetic process1 (2.44%)1000000000
GO:0006644phospholipid metabolic process1 (2.44%)1000000000
GO:0009853photorespiration1 (2.44%)0000100000
GO:0048868pollen tube development1 (2.44%)1000000000
GO:0009860pollen tube growth1 (2.44%)1000000000
GO:0009856pollination1 (2.44%)1000000000
GO:0000271polysaccharide biosynthetic process1 (2.44%)1000000000
GO:0033037polysaccharide localization1 (2.44%)0010000000
GO:0005976polysaccharide metabolic process1 (2.44%)1000000000
GO:0016441posttranscriptional gene silencing1 (2.44%)0100000000
GO:0010608posttranscriptional regulation of gene expression1 (2.44%)0100000000
GO:0012501programmed cell death1 (2.44%)0000010000
GO:0010498proteasomal protein catabolic process1 (2.44%)1000000000
GO:0043248proteasome assembly1 (2.44%)1000000000
GO:0043161proteasome-mediated ubiquitin-dependent protein catabolic process1 (2.44%)1000000000
GO:0030163protein catabolic process1 (2.44%)1000000000
GO:0006461protein complex assembly1 (2.44%)1000000000
GO:0070271protein complex biogenesis1 (2.44%)1000000000
GO:0043241protein complex disassembly1 (2.44%)0000100000
GO:0006470protein dephosphorylation1 (2.44%)0000000001
GO:0051261protein depolymerization1 (2.44%)0000100000
GO:0008104protein localization1 (2.44%)0000100000
GO:0015031protein transport1 (2.44%)0000100000
GO:0006508proteolysis1 (2.44%)1000000000
GO:0051603proteolysis involved in cellular protein catabolic process1 (2.44%)1000000000
GO:0042558pteridine-containing compound metabolic process1 (2.44%)0000100000
GO:0009127purine nucleoside monophosphate biosynthetic process1 (2.44%)0000100000
GO:0009126purine nucleoside monophosphate metabolic process1 (2.44%)0000100000
GO:0006164purine nucleotide biosynthetic process1 (2.44%)0000100000
GO:0006163purine nucleotide metabolic process1 (2.44%)0000100000
GO:0009168purine ribonucleoside monophosphate biosynthetic process1 (2.44%)0000100000
GO:0009167purine ribonucleoside monophosphate metabolic process1 (2.44%)0000100000
GO:0009152purine ribonucleotide biosynthetic process1 (2.44%)0000100000
GO:0009150purine ribonucleotide metabolic process1 (2.44%)0000100000
GO:0072522purine-containing compound biosynthetic process1 (2.44%)0000100000
GO:0072521purine-containing compound metabolic process1 (2.44%)0000100000
GO:0019362pyridine nucleotide metabolic process1 (2.44%)0000001000
GO:0072524pyridine-containing compound metabolic process1 (2.44%)0000001000
GO:0040029regulation of gene expression, epigenetic1 (2.44%)0100000000
GO:0048608reproductive structure development1 (2.44%)0100000000
GO:0061458reproductive system development1 (2.44%)0100000000
GO:0009617response to bacterium1 (2.44%)0010000000
GO:0046686response to cadmium ion1 (2.44%)1000000000
GO:0009723response to ethylene1 (2.44%)0010000000
GO:0010035response to inorganic substance1 (2.44%)1000000000
GO:0009625response to insect1 (2.44%)0010000000
GO:0080167response to karrikin1 (2.44%)0010000000
GO:0010038response to metal ion1 (2.44%)1000000000
GO:0051788response to misfolded protein1 (2.44%)1000000000
GO:0006970response to osmotic stress1 (2.44%)0010000000
GO:0009651response to salt stress1 (2.44%)0010000000
GO:0035966response to topologically incorrect protein1 (2.44%)1000000000
GO:0009156ribonucleoside monophosphate biosynthetic process1 (2.44%)0000100000
GO:0009161ribonucleoside monophosphate metabolic process1 (2.44%)0000100000
GO:0009260ribonucleotide biosynthetic process1 (2.44%)0000100000
GO:0009259ribonucleotide metabolic process1 (2.44%)0000100000
GO:0046390ribose phosphate biosynthetic process1 (2.44%)0000100000
GO:0019693ribose phosphate metabolic process1 (2.44%)0000100000
GO:0010053root epidermal cell differentiation1 (2.44%)0000100000
GO:0080147root hair cell development1 (2.44%)0000100000
GO:0048765root hair cell differentiation1 (2.44%)0000100000
GO:0048767root hair elongation1 (2.44%)0000100000
GO:0010015root morphogenesis1 (2.44%)0000100000
GO:0048316seed development1 (2.44%)0100000000
GO:0044724single-organism carbohydrate catabolic process1 (2.44%)0000001000
GO:0044712single-organism catabolic process1 (2.44%)0000001000
GO:0043588skin development1 (2.44%)0000100000
GO:0044283small molecule biosynthetic process1 (2.44%)1000000000
GO:0019252starch biosynthetic process1 (2.44%)1000000000
GO:0005982starch metabolic process1 (2.44%)1000000000
GO:0043039tRNA aminoacylation1 (2.44%)0100000000
GO:0006418tRNA aminoacylation for protein translation1 (2.44%)0100000000
GO:0006399tRNA metabolic process1 (2.44%)0100000000
GO:0046653tetrahydrofolate metabolic process1 (2.44%)0000100000
GO:0009888tissue development1 (2.44%)0000100000
GO:0010054trichoblast differentiation1 (2.44%)0000100000
GO:0048764trichoblast maturation1 (2.44%)0000100000
GO:0006511ubiquitin-dependent protein catabolic process1 (2.44%)1000000000
GO:0009826unidimensional cell growth1 (2.44%)1000000000
GO:0016192vesicle-mediated transport1 (2.44%)0000100000

Cellular Component (back to top)

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GODescription#Associated genes ath bra cme egr gma ptr ppe sly stu vvi
GO:0005623cell26 (63.41%)4221464003
GO:0044464cell part26 (63.41%)4221464003
GO:0005622intracellular23 (56.10%)4221453002
GO:0044424intracellular part23 (56.10%)4221453002
GO:0043229intracellular organelle21 (51.22%)3221353002
GO:0043226organelle21 (51.22%)3221353002
GO:0043231intracellular membrane-bounded organelle19 (46.34%)3220253002
GO:0043227membrane-bounded organelle19 (46.34%)3220253002
GO:0005737cytoplasm18 (43.90%)3221413002
GO:0044444cytoplasmic part17 (41.46%)2221413002
GO:0016020membrane11 (26.83%)1110112004
GO:0071944cell periphery8 (19.51%)1110012002
GO:0044425membrane part7 (17.07%)1000102003
GO:0005886plasma membrane7 (17.07%)1110011002
GO:0005794Golgi apparatus6 (14.63%)1010101002
GO:0032991macromolecular complex6 (14.63%)1001201001
GO:0005634nucleus6 (14.63%)2000040000
GO:0009507chloroplast4 (9.76%)1100002000
GO:0005829cytosol4 (9.76%)1110100000
GO:0016021integral to membrane4 (9.76%)1000001002
GO:0044446intracellular organelle part4 (9.76%)0101100001
GO:0031224intrinsic to membrane4 (9.76%)1000001002
GO:0005739mitochondrion4 (9.76%)0100111000
GO:0044422organelle part4 (9.76%)0101100001
GO:0009536plastid4 (9.76%)1100002000
GO:0043234protein complex4 (9.76%)1000101001
GO:0005773vacuole3 (7.32%)2100000000
GO:0048046apoplast2 (4.88%)1100000000
GO:0030054cell junction2 (4.88%)1100000000
GO:0005911cell-cell junction2 (4.88%)1100000000
GO:0009898cytoplasmic side of plasma membrane2 (4.88%)0000001001
GO:0005576extracellular region2 (4.88%)1100000000
GO:0031234extrinsic to cytoplasmic side of plasma membrane2 (4.88%)0000001001
GO:0019898extrinsic to membrane2 (4.88%)0000001001
GO:0019897extrinsic to plasma membrane2 (4.88%)0000001001
GO:0005834heterotrimeric G-protein complex2 (4.88%)0000001001
GO:0043232intracellular non-membrane-bounded organelle2 (4.88%)0001100000
GO:0015934large ribosomal subunit2 (4.88%)0001100000
GO:0043228non-membrane-bounded organelle2 (4.88%)0001100000
GO:0031090organelle membrane2 (4.88%)0100000001
GO:0044459plasma membrane part2 (4.88%)0000001001
GO:0009506plasmodesma2 (4.88%)1100000000
GO:0030529ribonucleoprotein complex2 (4.88%)0001100000
GO:0044391ribosomal subunit2 (4.88%)0001100000
GO:0005840ribosome2 (4.88%)0001100000
GO:0055044symplast2 (4.88%)1100000000
GO:0030119AP-type membrane coat adaptor complex1 (2.44%)0000100000
GO:0044431Golgi apparatus part1 (2.44%)0000000001
GO:0000139Golgi membrane1 (2.44%)0000000001
GO:0005618cell wall1 (2.44%)0000001000
GO:0030131clathrin adaptor complex1 (2.44%)0000100000
GO:0030118clathrin coat1 (2.44%)0000100000
GO:0048475coated membrane1 (2.44%)0000100000
GO:0012505endomembrane system1 (2.44%)0000000001
GO:0005783endoplasmic reticulum1 (2.44%)0010000000
GO:0030312external encapsulating structure1 (2.44%)0000001000
GO:0030117membrane coat1 (2.44%)0000100000
GO:0000502proteasome complex1 (2.44%)1000000000
GO:0005839proteasome core complex1 (2.44%)1000000000
GO:0005774vacuolar membrane1 (2.44%)0100000000
GO:0044437vacuolar part1 (2.44%)0100000000