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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Sro196_g083660
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Sro196_g083660
Seminavis robusta
4.5e-89
329.3
279
100.0
ptri110440
Phaeodactylum tricornutum
1.8e-37
157.9
106
70.8
sya00G243310
Synedra acus
5.8e-36
152.9
110
62.7
sya00G192990
Synedra acus
7.6e-36
152.5
110
61.8
gene15620
Fragilariopsis cylindrus
9.9e-36
152.1
111
61.3
ps00G37350
Pseudo-nitzschia multiseries
2.4e-34
147.5
106
66.0
tps77500
Thalassiosira pseudonana
9.3e-34
145.6
116
56.9
fso93680
Fistulifera solaris
3.0e-32
140.6
105
60.0
tho339780
Thalassiosira oceanica
8.7e-32
139.0
110
56.4
CC00G187920
Cyclotella cryptica
3.3e-31
137.1
118
56.8
Naga_100218g6
Nannochloropsis gaditana
3.4e-28
127.1
111
54.1
AA0025G00160
Aureococcus anophagefferens
2.2e-27
124.4
110
47.3
WBGene00021901
Caenorhabditis elegans
3.8e-27
123.6
110
53.6
Ec-23_000060
Ectocarpus siliculosus
8.4e-27
122.5
106
51.9
PSNMU-V1.4_AUG-EV-PASAV3_0036820
Pseudo-nitzschia multistriata
1.9e-26
121.3
121
50.4
Cre02.g088800
Chlamydomonas reinhardtii
1.6e-25
118.2
106
52.8
ENSG00000126254
Homo sapiens
2.1e-25
117.9
110
50.9
FBgn0037342
Drosophila melanogaster
3.5e-25
117.1
110
48.2
AT3G04500
Arabidopsis thaliana
1.3e-24
115.2
103
48.5
emh689550
Emiliania huxleyi
3.9e-24
113.6
103
50.5
Pp3c23_14650
Physcomitrella patens
8.2e-22
105.9
103
46.6
pte95410
Paramecium tetraurelia
1.5e-20
101.7
103
41.7
SPAC22E12.02
Schizosaccharomyces pombe
1.5e-20
101.7
99
48.5
ccr63040
Chondrus crispus
2.9e-19
97.4
104
44.2
gsu102530
Galdieria sulphuraria
2.7e-17
90.9
104
40.4
WBGene00015943
Caenorhabditis elegans
8.5e-11
69.3
83
45.8
WBGene00012904
Caenorhabditis elegans
5.5e-10
66.6
83
42.2
FBgn0085391
Drosophila melanogaster
4.6e-09
63.5
96
38.5
AT3G14100
Arabidopsis thaliana
1.0e-08
62.4
74
44.6
WBGene00003902
Caenorhabditis elegans
1.0e-08
62.4
80
38.8
Pp3c2_9144
Physcomitrella patens
1.0e-08
62.4
74
44.6
AT3G19130
Arabidopsis thaliana
3.9e-08
60.5
77
45.5
Pp3c2_9140
Physcomitrella patens
5.1e-08
60.1
74
43.2
YER165W
Saccharomyces cerevisiae strain S288C
5.1e-08
60.1
80
38.8
SPAC57A7.04c
Schizosaccharomyces pombe
5.1e-08
60.1
80
37.5
AT1G17370
Arabidopsis thaliana
6.7e-08
59.7
74
44.6
AT1G49600
Arabidopsis thaliana
6.7e-08
59.7
77
45.5
Pp3c4_13300
Physcomitrella patens
6.7e-08
59.7
81
43.2
WBGene00007396
Caenorhabditis elegans
8.8e-08
59.3
83
37.3
Pp3c12_10960
Physcomitrella patens
8.8e-08
59.3
81
43.2
Pp3c12_10910
Physcomitrella patens
8.8e-08
59.3
81
43.2
AT1G47490
Arabidopsis thaliana
1.1e-07
58.9
77
46.8
ENSG00000151923
Homo sapiens
2.5e-07
57.8
85
37.6
AA0039G00410
Aureococcus anophagefferens
3.3e-07
57.4
80
36.2
AT1G47500
Arabidopsis thaliana
3.3e-07
57.4
77
45.5
ENSG00000116001
Homo sapiens
3.3e-07
57.4
86
36.0
FBgn0005649
Drosophila melanogaster
4.3e-07
57.0
81
37.0
CM10G02890
Cyanidioschyzon merolae
5.7e-07
56.6
84
33.3
AT1G54080
Arabidopsis thaliana
7.4e-07
56.2
77
40.3
Ec-02_005930
Ectocarpus siliculosus
7.4e-07
56.2
80
33.8
WBGene00003903
Caenorhabditis elegans
1.3e-06
55.5
80
32.5
ENSG00000180098
Homo sapiens
1.3e-06
55.5
97
39.2
Pp3c24_17170
Physcomitrella patens
1.7e-06
55.1
89
36.0
ps00G49310
Pseudo-nitzschia multiseries
1.7e-06
55.1
92
31.5
AA0030G00040
Aureococcus anophagefferens
2.8e-06
54.3
80
35.0
AA0034G00660
Aureococcus anophagefferens
2.8e-06
54.3
85
37.6
AT1G11650
Arabidopsis thaliana
2.8e-06
54.3
77
41.6
fso191800
Fistulifera solaris
2.8e-06
54.3
92
29.3
ENSG00000090621
Homo sapiens
2.8e-06
54.3
80
33.8
PSNMU-V1.4_AUG-EV-PASAV3_0064060
Pseudo-nitzschia multistriata
2.8e-06
54.3
98
30.6
Cre16.g652900
Chlamydomonas reinhardtii
3.7e-06
53.9
78
42.3
AT2G37220
Arabidopsis thaliana
4.8e-06
53.5
78
37.2
AT5G54900
Arabidopsis thaliana
4.8e-06
53.5
77
42.9
AT4G24770
Arabidopsis thaliana
6.3e-06
53.1
75
40.0
AT4G27000
Arabidopsis thaliana
6.3e-06
53.1
72
38.9
ENSG00000070756
Homo sapiens
6.3e-06
53.1
80
32.5
ENSG00000102317
Homo sapiens
6.3e-06
53.1
74
33.8
Pp3c17_4050
Physcomitrella patens
6.3e-06
53.1
85
36.5
AT3G53460
Arabidopsis thaliana
8.2e-06
52.8
78
35.9
Naga_100570g3
Nannochloropsis gaditana
8.2e-06
52.8
80
38.8
Pp3c14_4340
Physcomitrella patens
8.2e-06
52.8
81
34.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (4 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (7 genes)
Drosophila melanogaster (3 genes)
Caenorhabditis elegans (6 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (14 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (1 genes)
Synedra acus (2 genes)
Physcomitrella patens (9 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing