Gene: ENSG00000180098 (Homo sapiens)

Overview top

Gene Identifier
ENSG00000180098
Transcript Identifier
ENST00000373830
Gene Type
Coding gene
Location
1 : 28553111-28577636 : positive

Family Information

Homologous gene family
HOM02SEM000060
(309 genes in 26 species)
specific family
Duplication type
Block duplicate

Descriptions

gene_descr
tRNA selenocysteine 1 associated protein 1

Identifiers

Type Value
pidENSP00000362936
HGNC30813
UniprotQ9NX07
RefSeq_mRNANM_017846.4
EMBLAK000510
EMBLAL513497
EMBLBC000680
EMBLBC039879
EMBLCH471059

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001514
ISS
Genome Projectselenocysteine incorporation
GO:0001514
ISS
Gene Ontologyselenocysteine incorporation
GO:0048519
IEA
PLAZA Integrative Orthologynegative regulation of biological process SPAC17A2.09c
GO:0048518
IEA
PLAZA Integrative Orthologypositive regulation of biological process SPAC17A2.09c
GO:0000184
IEA
PLAZA Integrative Orthologynuclear-transcribed mRNA catabolic process, nonsense-mediated decay YNL016W
GO:0048522
IEA
PLAZA Integrative Orthologypositive regulation of cellular process YBR212W
GO:0034622
IEA
PLAZA Integrative Orthologycellular protein-containing complex assembly AT3G19130
GO:2000113
IEA
PLAZA Integrative Orthologynegative regulation of cellular macromolecule biosynthetic process YBR212W
GO:0051248
IEA
PLAZA Integrative Orthologynegative regulation of protein metabolic process YBR212W
GO:0065008
IEA
PLAZA Integrative Orthologyregulation of biological quality SPAC17A2.09c
GO:0034063
IEA
PLAZA Integrative Orthologystress granule assembly AT3G19130
GO:0010033
IEA
PLAZA Integrative Orthologyresponse to organic substance AT1G49600
GO:0045935
IEA
PLAZA Integrative Orthologypositive regulation of nucleobase-containing compound metabolic process YBR212W
GO:0065003
IEA
PLAZA Integrative Orthologyprotein-containing complex assembly AT3G19130
GO:0048523
IEA
PLAZA Integrative Orthologynegative regulation of cellular process SPAC17A2.09c
GO:0009725
IEA
PLAZA Integrative Orthologyresponse to hormone AT1G49600
GO:0045934
IEA
PLAZA Integrative Orthologynegative regulation of nucleobase-containing compound metabolic process SPAC17A2.09c
GO:0006725
IEA
PLAZA Integrative Orthologycellular aromatic compound metabolic process SPAC17A2.09c
GO:0050685
IEA
PLAZA Integrative Orthologypositive regulation of mRNA processing YHR086W
GO:0050684
IEA
PLAZA Integrative Orthologyregulation of mRNA processing YHR086W
GO:0051253
IEA
PLAZA Integrative Orthologynegative regulation of RNA metabolic process SPAC17A2.09c
GO:0051254
IEA
PLAZA Integrative Orthologypositive regulation of RNA metabolic process YBR212W
GO:0043484
IEA
PLAZA Integrative Orthologyregulation of RNA splicing YHR086W
GO:0051252
IEA
PLAZA Integrative Orthologyregulation of RNA metabolic process SPAC17A2.09c
GO:0048255
IEA
PLAZA Integrative OrthologymRNA stabilization SPAC17A2.09c
GO:0009719
IEA
PLAZA Integrative Orthologyresponse to endogenous stimulus AT1G49600
GO:0019219
IEA
PLAZA Integrative Orthologyregulation of nucleobase-containing compound metabolic process SPAC17A2.09c
GO:1901361
IEA
PLAZA Integrative Orthologyorganic cyclic compound catabolic process SPAC17A2.09c
GO:1901360
IEA
PLAZA Integrative Orthologyorganic cyclic compound metabolic process SPAC17A2.09c
GO:0009893
IEA
PLAZA Integrative Orthologypositive regulation of metabolic process SPAC17A2.09c
GO:0009892
IEA
PLAZA Integrative Orthologynegative regulation of metabolic process SPAC17A2.09c
GO:0033120
IEA
PLAZA Integrative Orthologypositive regulation of RNA splicing YHR086W
GO:0000956
IEA
PLAZA Integrative Orthologynuclear-transcribed mRNA catabolic process YNL016W
GO:0009890
IEA
PLAZA Integrative Orthologynegative regulation of biosynthetic process YBR212W
GO:0009896
IEA
PLAZA Integrative Orthologypositive regulation of catabolic process YBR212W
GO:0043488
IEA
PLAZA Integrative Orthologyregulation of mRNA stability SPAC17A2.09c
GO:0009895
IEA
PLAZA Integrative Orthologynegative regulation of catabolic process SPAC17A2.09c
GO:0009894
IEA
PLAZA Integrative Orthologyregulation of catabolic process SPAC17A2.09c
GO:0043487
IEA
PLAZA Integrative Orthologyregulation of RNA stability SPAC17A2.09c
GO:0043489
IEA
PLAZA Integrative OrthologyRNA stabilization SPAC17A2.09c
GO:0000398
IEA
PLAZA Integrative OrthologymRNA splicing, via spliceosome YHR086W
GO:2000815
IEA
PLAZA Integrative Orthologyregulation of mRNA stability involved in response to oxidative stress SPAC17A2.09c
GO:0046483
IEA
PLAZA Integrative Orthologyheterocycle metabolic process SPAC17A2.09c
GO:0016070
IEA
PLAZA Integrative OrthologyRNA metabolic process SPAC17A2.09c
GO:0016071
IEA
PLAZA Integrative OrthologymRNA metabolic process SPAC17A2.09c
GO:0048026
IEA
PLAZA Integrative Orthologypositive regulation of mRNA splicing, via spliceosome YHR086W
GO:0048024
IEA
PLAZA Integrative Orthologyregulation of mRNA splicing, via spliceosome YHR086W
GO:0031330
IEA
PLAZA Integrative Orthologynegative regulation of cellular catabolic process SPAC17A2.09c
GO:0031331
IEA
PLAZA Integrative Orthologypositive regulation of cellular catabolic process YBR212W
GO:0032269
IEA
PLAZA Integrative Orthologynegative regulation of cellular protein metabolic process YBR212W
GO:0043933
IEA
PLAZA Integrative Orthologyprotein-containing complex subunit organization AT3G19130
GO:0071826
IEA
PLAZA Integrative Orthologyribonucleoprotein complex subunit organization AT3G19130
GO:1903311
IEA
PLAZA Integrative Orthologyregulation of mRNA metabolic process SPAC17A2.09c
GO:1903312
IEA
PLAZA Integrative Orthologynegative regulation of mRNA metabolic process SPAC17A2.09c
GO:0022618
IEA
PLAZA Integrative Orthologyribonucleoprotein complex assembly AT3G19130
GO:0022613
IEA
PLAZA Integrative Orthologyribonucleoprotein complex biogenesis AT3G19130
GO:1903313
IEA
PLAZA Integrative Orthologypositive regulation of mRNA metabolic process YBR212W
GO:0006396
IEA
PLAZA Integrative OrthologyRNA processing YHR086W
GO:0006397
IEA
PLAZA Integrative OrthologymRNA processing YHR086W
GO:0006950
IEA
PLAZA Integrative Orthologyresponse to stress SPAC17A2.09c
GO:0007005
IEA
PLAZA Integrative Orthologymitochondrion organization YBR212W
GO:0031329
IEA
PLAZA Integrative Orthologyregulation of cellular catabolic process SPAC17A2.09c
GO:0031327
IEA
PLAZA Integrative Orthologynegative regulation of cellular biosynthetic process YBR212W
GO:0051716
IEA
PLAZA Integrative Orthologycellular response to stimulus SPAC17A2.09c
GO:0031325
IEA
PLAZA Integrative Orthologypositive regulation of cellular metabolic process YBR212W
GO:0031324
IEA
PLAZA Integrative Orthologynegative regulation of cellular metabolic process SPAC17A2.09c
GO:0019439
IEA
PLAZA Integrative Orthologyaromatic compound catabolic process SPAC17A2.09c
GO:0061013
IEA
PLAZA Integrative Orthologyregulation of mRNA catabolic process SPAC17A2.09c
GO:0061014
IEA
PLAZA Integrative Orthologypositive regulation of mRNA catabolic process YBR212W
GO:0008380
IEA
PLAZA Integrative OrthologyRNA splicing YHR086W
GO:0070925
IEA
PLAZA Integrative Orthologyorganelle assembly AT3G19130
GO:0022607
IEA
PLAZA Integrative Orthologycellular component assembly AT3G19130
GO:0051172
IEA
PLAZA Integrative Orthologynegative regulation of nitrogen compound metabolic process SPAC17A2.09c
GO:0051173
IEA
PLAZA Integrative Orthologypositive regulation of nitrogen compound metabolic process YBR212W
GO:0006402
IEA
PLAZA Integrative OrthologymRNA catabolic process SPAC17A2.09c
GO:1901700
IEA
PLAZA Integrative Orthologyresponse to oxygen-containing compound AT1G11650
GO:0000377
IEA
PLAZA Integrative OrthologyRNA splicing, via transesterification reactions with bulged adenosine as nucleophile YHR086W
GO:0006401
IEA
PLAZA Integrative OrthologyRNA catabolic process SPAC17A2.09c
GO:0044085
IEA
PLAZA Integrative Orthologycellular component biogenesis AT3G19130
GO:0010610
IEA
PLAZA Integrative Orthologyregulation of mRNA stability involved in response to stress SPAC17A2.09c
GO:0017148
IEA
PLAZA Integrative Orthologynegative regulation of translation YBR212W
GO:0070887
IEA
PLAZA Integrative Orthologycellular response to chemical stimulus SPAC17A2.09c
GO:0090304
IEA
PLAZA Integrative Orthologynucleic acid metabolic process SPAC17A2.09c
GO:0010193
IEA
PLAZA Integrative Orthologyresponse to ozone AT1G11650
GO:1902369
IEA
PLAZA Integrative Orthologynegative regulation of RNA catabolic process SPAC17A2.09c
GO:0006376
IEA
PLAZA Integrative OrthologymRNA splice site selection YHR086W
GO:0046700
IEA
PLAZA Integrative Orthologyheterocycle catabolic process SPAC17A2.09c
GO:0042221
IEA
PLAZA Integrative Orthologyresponse to chemical SPAC17A2.09c
GO:0000302
IEA
PLAZA Integrative Orthologyresponse to reactive oxygen species AT1G11650
GO:0006139
IEA
PLAZA Integrative Orthologynucleobase-containing compound metabolic process SPAC17A2.09c
GO:0044248
IEA
PLAZA Integrative Orthologycellular catabolic process SPAC17A2.09c
GO:0010629
IEA
PLAZA Integrative Orthologynegative regulation of gene expression SPAC17A2.09c
GO:0010628
IEA
PLAZA Integrative Orthologypositive regulation of gene expression SPAC17A2.09c
GO:0034655
IEA
PLAZA Integrative Orthologynucleobase-containing compound catabolic process SPAC17A2.09c
GO:0016043
IEA
PLAZA Integrative Orthologycellular component organization AT3G19130
GO:0071840
IEA
PLAZA Integrative Orthologycellular component organization or biogenesis AT3G19130
GO:1902373
IEA
PLAZA Integrative Orthologynegative regulation of mRNA catabolic process SPAC17A2.09c
GO:0061157
IEA
PLAZA Integrative OrthologymRNA destabilization YBR212W
GO:0061158
IEA
PLAZA Integrative Orthology3'-UTR-mediated mRNA destabilization YBR212W
GO:0009057
IEA
PLAZA Integrative Orthologymacromolecule catabolic process SPAC17A2.09c
GO:0009056
IEA
PLAZA Integrative Orthologycatabolic process SPAC17A2.09c
GO:0046677
IEA
PLAZA Integrative Orthologyresponse to antibiotic AT1G11650
GO:0009735
IEA
PLAZA Integrative Orthologyresponse to cytokinin AT1G49600
GO:0006979
IEA
PLAZA Integrative Orthologyresponse to oxidative stress SPAC17A2.09c
GO:0044265
IEA
PLAZA Integrative Orthologycellular macromolecule catabolic process SPAC17A2.09c
GO:0033554
IEA
PLAZA Integrative Orthologycellular response to stress SPAC17A2.09c
GO:0010558
IEA
PLAZA Integrative Orthologynegative regulation of macromolecule biosynthetic process YBR212W
GO:0050779
IEA
PLAZA Integrative OrthologyRNA destabilization YBR212W
GO:0010035
IEA
PLAZA Integrative Orthologyresponse to inorganic substance AT1G11650
GO:0050896
IEA
PLAZA Integrative Orthologyresponse to stimulus SPAC17A2.09c
GO:0034249
IEA
PLAZA Integrative Orthologynegative regulation of cellular amide metabolic process YBR212W
GO:1901575
IEA
PLAZA Integrative Orthologyorganic substance catabolic process SPAC17A2.09c
GO:0006996
IEA
PLAZA Integrative Orthologyorganelle organization AT3G19130
GO:0000245
IEA
PLAZA Integrative Orthologyspliceosomal complex assembly YHR086W
GO:0044270
IEA
PLAZA Integrative Orthologycellular nitrogen compound catabolic process SPAC17A2.09c
GO:0001101
IEA
PLAZA Integrative Orthologyresponse to acid chemical AT1G11650
GO:0000375
IEA
PLAZA Integrative OrthologyRNA splicing, via transesterification reactions YHR086W
GO:0010604
IEA
PLAZA Integrative Orthologypositive regulation of macromolecule metabolic process SPAC17A2.09c
GO:0042493
IEA
PLAZA Integrative Orthologyresponse to drug AT1G11650
GO:0010605
IEA
PLAZA Integrative Orthologynegative regulation of macromolecule metabolic process SPAC17A2.09c
GO:0034599
IEA
PLAZA Integrative Orthologycellular response to oxidative stress SPAC17A2.09c

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IDA
Genome ProjectRNA binding
GO:0003723
Gene OntologyRNA binding1 2
GO:0008187
IEA
PLAZA Integrative Orthologypoly-pyrimidine tract binding YNL016W
GO:0036094
IEA
PLAZA Homology (enrichment)small molecule binding HOM02SEM000060
GO:0003727
IEA
PLAZA Integrative Orthologysingle-stranded RNA binding YNL016W
GO:0003729
IEA
PLAZA Integrative OrthologymRNA binding SPAC17A2.09c
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding AT1G17370
GO:0000166
IEA
PLAZA Homology (enrichment)nucleotide binding HOM02SEM000060
GO:1901265
IEA
PLAZA Homology (enrichment)nucleoside phosphate binding HOM02SEM000060
GO:0008266
IEA
PLAZA Integrative Orthologypoly(U) RNA binding YNL016W

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
Genome Projectcytoplasm
GO:0005634
ISS
Genome Projectnucleus
GO:0005634
ISS
Gene Ontologynucleus
GO:0120114
IEA
PLAZA Integrative OrthologySm-like protein family complex YHR086W
GO:0043228
IEA
PLAZA Integrative Orthologynon-membrane-bounded organelle SPBC23E6.01c
GO:0071010
IEA
PLAZA Integrative Orthologyprespliceosome YHR086W
GO:0097525
IEA
PLAZA Integrative Orthologyspliceosomal snRNP complex YHR086W
GO:0043232
IEA
PLAZA Integrative Orthologyintracellular non-membrane-bounded organelle SPBC23E6.01c
GO:0044444
IEA
PLAZA Integrative Orthologycytoplasmic part SPBC23E6.01c
GO:0044446
IEA
PLAZA Integrative Orthologyintracellular organelle part YHR086W
GO:0005886
IEA
PLAZA Integrative Orthologyplasma membrane AT1G54080
GO:0071004
IEA
PLAZA Integrative OrthologyU2-type prespliceosome YHR086W
GO:0030532
IEA
PLAZA Integrative Orthologysmall nuclear ribonucleoprotein complex YHR086W
GO:0035770
IEA
PLAZA Integrative Orthologyribonucleoprotein granule SPBC23E6.01c
GO:0036464
IEA
PLAZA Integrative Orthologycytoplasmic ribonucleoprotein granule SPBC23E6.01c
GO:0010494
IEA
PLAZA Integrative Orthologycytoplasmic stress granule SPBC23E6.01c
GO:0071944
IEA
PLAZA Integrative Orthologycell periphery AT1G54080
GO:0000932
IEA
PLAZA Integrative OrthologyP-body YNL016W
GO:0005829
IEA
PLAZA Integrative Orthologycytosol SPBC23E6.01c
GO:0005681
IEA
PLAZA Integrative Orthologyspliceosomal complex YHR086W
GO:0005684
IEA
PLAZA Integrative OrthologyU2-type spliceosomal complex YHR086W
GO:0005685
IEA
PLAZA Integrative OrthologyU1 snRNP YHR086W
GO:0032991
IEA
PLAZA Integrative Orthologyprotein-containing complex SPBC23E6.01c
GO:0000243
IEA
PLAZA Integrative Orthologycommitment complex YHR086W
GO:1990904
IEA
PLAZA Integrative Orthologyribonucleoprotein complex SPBC23E6.01c
GO:0044428
IEA
PLAZA Integrative Orthologynuclear part YHR086W
GO:0044422
IEA
PLAZA Integrative Orthologyorganelle part YHR086W
GO:0048471
IEA
PLAZA Integrative Orthologyperinuclear region of cytoplasm YBR212W
GO:0016020
IEA
PLAZA Integrative Orthologymembrane AT1G54080

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000504RNA recognition motif domain
IPR034510SECp43, RNA recognition motif 2

No MapMan annotations defined for this gene.
No Kegg annotations defined for this gene.
No chloroplast target sequence found.