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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Sro1732_g294180
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Sro1732_g294180
Seminavis robusta
5.3e-47
188.7
154
100.0
CC00G169110
Cyclotella cryptica
3.9e-18
92.8
70
61.4
ptri59120
Phaeodactylum tricornutum
6.3e-16
85.5
70
58.6
AT4G38680
Arabidopsis thaliana
2.4e-15
83.6
70
58.6
Sro2322_g323260
Seminavis robusta
4.1e-15
82.8
75
56.0
tho165980
Thalassiosira oceanica
5.3e-15
82.4
71
57.7
AT2G21060
Arabidopsis thaliana
9.1e-15
81.6
70
58.6
tps147210
Thalassiosira pseudonana
9.1e-15
81.6
67
59.7
Pp3c6_23240
Physcomitrella patens
1.2e-14
81.3
77
53.2
Pp3c5_7920
Physcomitrella patens
1.2e-14
81.3
77
53.2
Pp3c5_6070
Physcomitrella patens
1.6e-14
80.9
76
53.9
sya00G55950
Synedra acus
1.6e-14
80.9
78
53.8
AA0009G00460
Aureococcus anophagefferens
2.0e-14
80.5
71
57.7
Sro79_g042740
Seminavis robusta
1.0e-13
78.2
70
54.3
ptri131910
Phaeodactylum tricornutum
3.8e-13
76.3
77
51.9
tps130240
Thalassiosira pseudonana
3.8e-13
76.3
77
49.4
CC00G27610
Cyclotella cryptica
6.5e-13
75.5
75
50.7
Cre06.g268600
Chlamydomonas reinhardtii
8.5e-13
75.1
74
51.4
emh663730
Emiliania huxleyi
1.9e-12
73.9
78
52.6
gene16842
Fragilariopsis cylindrus
3.2e-12
73.2
75
54.7
emh53840
Emiliania huxleyi
5.5e-12
72.4
70
51.4
ps00G159310
Pseudo-nitzschia multiseries
5.5e-12
72.4
78
52.6
Pp3c5_7880
Physcomitrella patens
7.2e-12
72.0
69
53.6
tps80080
Thalassiosira pseudonana
2.7e-11
70.1
81
46.9
AT2G17870
Arabidopsis thaliana
6.1e-11
68.9
81
44.4
AT4G36020
Arabidopsis thaliana
6.1e-11
68.9
64
50.0
fso79320
Fistulifera solaris
6.1e-11
68.9
93
44.1
fso162400
Fistulifera solaris
6.1e-11
68.9
93
44.1
Sro42_g025490
Seminavis robusta
2.3e-10
67.0
78
44.9
emh750730
Emiliania huxleyi
3.0e-10
66.6
73
47.9
emh344660
Emiliania huxleyi
6.7e-10
65.5
69
47.8
ENSG00000187772
Homo sapiens
4.8e-08
59.3
79
44.3
ENSG00000131914
Homo sapiens
8.2e-08
58.5
70
48.6
Naga_100339g1
Nannochloropsis gaditana
1.1e-07
58.2
66
45.5
sya00G264110
Synedra acus
5.3e-07
55.8
60
50.0
ENSG00000060138
Homo sapiens
7.0e-07
55.5
74
44.6
ps00G111300
Pseudo-nitzschia multiseries
7.0e-07
55.5
71
45.1
PSNMU-V1.4_AUG-EV-PASAV3_0028820
Pseudo-nitzschia multistriata
2.0e-06
53.9
60
48.3
FBgn0035626
Drosophila melanogaster
2.7e-06
53.5
68
44.1
WBGene00000472
Caenorhabditis elegans
3.5e-06
53.1
89
41.6
PSNMU-V1.4_AUG-EV-PASAV3_0012560
Pseudo-nitzschia multistriata
3.5e-06
53.1
68
45.6
ps00G176840
Pseudo-nitzschia multiseries
4.5e-06
52.8
60
45.0
gene2072
Fragilariopsis cylindrus
5.9e-06
52.4
65
44.6
gene19153
Fragilariopsis cylindrus
5.9e-06
52.4
68
44.1
ENSG00000006047
Homo sapiens
7.7e-06
52.0
86
41.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (4 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (4 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (4 genes)
Synedra acus (2 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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