Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT5G08335
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT5G08335
Arabidopsis thaliana
9.0e-108
391.0
198
100.0
AT5G23320
Arabidopsis thaliana
7.2e-89
328.2
198
80.3
Pp3c3_35430
Physcomitrella patens
3.6e-56
219.5
191
53.9
ENSG00000116237
Homo sapiens
3.9e-42
172.9
194
45.4
FBgn0036336
Drosophila melanogaster
4.9e-37
156.0
194
42.3
ccr138800
Chondrus crispus
7.8e-35
148.7
191
42.4
YDR410C
Saccharomyces cerevisiae strain S288C
9.5e-33
141.7
201
38.3
WBGene00019710
Caenorhabditis elegans
1.6e-32
141.0
188
42.0
WBGene00017673
Caenorhabditis elegans
4.7e-32
139.4
187
42.2
Naga_100017g23
Nannochloropsis gaditana
2.3e-31
137.1
184
40.8
sya00G113290
Synedra acus
4.0e-31
136.3
184
36.4
sya00G144420
Synedra acus
6.8e-31
135.6
192
35.9
sya00G61930
Synedra acus
1.2e-30
134.8
184
35.9
AA0018G01100
Aureococcus anophagefferens
1.5e-30
134.4
181
39.8
SPAC10F6.12c
Schizosaccharomyces pombe
3.4e-30
133.3
195
36.9
CM08G02020
Cyanidioschyzon merolae
3.7e-29
129.8
192
37.0
ps00G36310
Pseudo-nitzschia multiseries
3.7e-29
129.8
115
49.6
Sro1993_g309940
Seminavis robusta
1.4e-28
127.9
187
39.0
PSNMU-V1.4_AUG-EV-PASAV3_0098280
Pseudo-nitzschia multistriata
5.4e-28
125.9
110
51.8
pte576270
Paramecium tetraurelia
3.5e-27
123.2
178
41.6
tps139960
Thalassiosira pseudonana
4.6e-27
122.9
177
36.7
gene7304
Fragilariopsis cylindrus
1.0e-26
121.7
110
48.2
ptri201130
Phaeodactylum tricornutum
3.0e-26
120.2
181
38.7
Sro102_g052090
Seminavis robusta
3.0e-26
120.2
176
38.1
fso173680
Fistulifera solaris
6.6e-26
119.0
187
36.9
emh260130
Emiliania huxleyi
7.3e-25
115.5
174
38.5
fso183010
Fistulifera solaris
7.3e-25
115.5
187
36.4
CM16G01740
Cyanidioschyzon merolae
8.1e-08
58.9
79
36.7
Cre03.g145427
Chlamydomonas reinhardtii
8.1e-08
58.9
141
27.0
Cre03.g145247
Chlamydomonas reinhardtii
4.5e-06
53.1
131
25.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (2 genes)
Synedra acus (3 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing