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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT3G07970
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT3G07970
Arabidopsis thaliana
2.3e-260
899.0
440
100.0
AT2G41850
Arabidopsis thaliana
1.1e-110
401.7
417
49.9
AT1G80170
Arabidopsis thaliana
2.6e-91
337.4
376
45.2
AT1G70500
Arabidopsis thaliana
6.5e-90
332.8
342
47.1
AT1G23460
Arabidopsis thaliana
1.2e-88
328.6
342
46.8
AT3G57510
Arabidopsis thaliana
1.1e-81
305.4
372
42.5
AT1G56710
Arabidopsis thaliana
6.7e-79
296.2
384
40.4
Pp3c15_15300
Physcomitrella patens
1.5e-78
295.0
359
41.8
AT2G43890
Arabidopsis thaliana
2.2e-77
291.2
372
42.5
AT3G15720
Arabidopsis thaliana
8.2e-77
289.3
367
41.4
AT1G48100
Arabidopsis thaliana
1.1e-73
278.9
368
39.7
AT1G05660
Arabidopsis thaliana
1.9e-73
278.1
340
42.1
AT3G26610
Arabidopsis thaliana
3.2e-73
277.3
391
40.2
AT5G14650
Arabidopsis thaliana
3.2e-73
277.3
359
41.5
Pp3c18_2210
Physcomitrella patens
1.6e-72
275.0
382
39.8
AT2G43860
Arabidopsis thaliana
3.6e-72
273.9
360
43.1
AT2G43870
Arabidopsis thaliana
4.7e-72
273.5
378
41.3
AT2G43880
Arabidopsis thaliana
4.7e-72
273.5
352
40.6
AT3G59850
Arabidopsis thaliana
6.1e-72
273.1
351
41.6
AT1G05650
Arabidopsis thaliana
1.0e-71
272.3
337
41.2
AT1G65570
Arabidopsis thaliana
1.0e-71
272.3
370
39.5
AT4G35670
Arabidopsis thaliana
1.4e-71
271.9
350
42.3
AT4G18180
Arabidopsis thaliana
1.8e-71
271.6
381
39.9
AT1G10640
Arabidopsis thaliana
7.4e-70
266.2
376
40.4
AT5G44840
Arabidopsis thaliana
1.7e-69
265.0
363
40.5
AT1G02460
Arabidopsis thaliana
2.2e-69
264.6
371
38.3
AT5G27530
Arabidopsis thaliana
5.3e-68
260.0
371
38.0
Pp3c23_3890
Physcomitrella patens
7.0e-68
259.6
387
40.3
AT5G17200
Arabidopsis thaliana
1.0e-66
255.8
392
39.0
AT2G15460
Arabidopsis thaliana
2.9e-66
254.2
377
39.0
AT1G60590
Arabidopsis thaliana
8.5e-66
252.7
383
37.1
AT2G15450
Arabidopsis thaliana
8.5e-66
252.7
377
38.7
AT3G14040
Arabidopsis thaliana
4.2e-65
250.4
359
37.0
AT1G02790
Arabidopsis thaliana
5.5e-65
250.0
397
37.5
AT3G07850
Arabidopsis thaliana
7.2e-65
249.6
359
37.0
AT2G26620
Arabidopsis thaliana
1.2e-64
248.8
375
37.9
AT2G15470
Arabidopsis thaliana
2.1e-64
248.1
377
38.2
AT2G33160
Arabidopsis thaliana
6.1e-64
246.5
376
37.2
AT1G43080
Arabidopsis thaliana
1.0e-63
245.7
381
37.8
AT1G78400
Arabidopsis thaliana
1.0e-63
245.7
370
37.0
AT3G07820
Arabidopsis thaliana
1.4e-63
245.4
366
35.8
AT1G43090
Arabidopsis thaliana
1.8e-63
245.0
377
37.9
AT1G43100
Arabidopsis thaliana
1.5e-62
241.9
377
37.7
AT5G44830
Arabidopsis thaliana
4.4e-62
240.4
323
38.7
AT4G13760
Arabidopsis thaliana
9.7e-62
239.2
381
36.7
AT2G40310
Arabidopsis thaliana
1.3e-61
238.8
381
37.0
AT1G17150
Arabidopsis thaliana
2.8e-61
237.7
377
36.3
AT5G48140
Arabidopsis thaliana
5.3e-60
233.4
373
34.0
AT5G39910
Arabidopsis thaliana
1.2e-59
232.3
385
35.1
AT3G07830
Arabidopsis thaliana
1.6e-59
231.9
357
35.0
AT3G07840
Arabidopsis thaliana
2.0e-59
231.5
370
34.9
AT4G01890
Arabidopsis thaliana
2.0e-59
231.5
373
36.2
AT1G80140
Arabidopsis thaliana
7.7e-59
229.6
335
35.5
AT4G32375
Arabidopsis thaliana
7.2e-57
223.0
344
35.5
AT4G32370
Arabidopsis thaliana
3.6e-56
220.7
297
39.7
AT4G32380
Arabidopsis thaliana
1.5e-54
215.3
274
39.8
AA0005G00450
Aureococcus anophagefferens
2.8e-40
167.9
370
30.0
emh733530
Emiliania huxleyi
1.8e-39
165.2
292
33.6
PSNMU-V1.4_AUG-EV-PASAV3_0112000
Pseudo-nitzschia multistriata
6.2e-24
113.6
422
24.6
Pp3c4_24360
Physcomitrella patens
1.8e-23
112.1
283
27.6
gene6671
Fragilariopsis cylindrus
4.1e-20
100.9
410
22.9
AT3G42950
Arabidopsis thaliana
1.6e-19
99.0
296
28.0
ps00G172510
Pseudo-nitzschia multiseries
1.6e-19
99.0
421
25.7
AT3G62110
Arabidopsis thaliana
2.1e-19
98.6
298
26.2
ptri107340
Phaeodactylum tricornutum
2.1e-19
98.6
202
33.2
AT4G23820
Arabidopsis thaliana
4.6e-19
97.4
260
28.8
Pp3c6_7160
Physcomitrella patens
3.0e-18
94.7
271
26.9
AT2G23900
Arabidopsis thaliana
6.6e-18
93.6
268
26.1
Sro3341_g346990
Seminavis robusta
1.1e-17
92.8
338
21.9
AT3G48950
Arabidopsis thaliana
5.6e-17
90.5
284
24.3
YJR153W
Saccharomyces cerevisiae strain S288C
5.6e-17
90.5
248
28.2
AT5G41870
Arabidopsis thaliana
7.3e-17
90.1
294
27.9
AT4G33440
Arabidopsis thaliana
9.5e-17
89.7
306
25.2
Pp3c23_13240
Physcomitrella patens
9.5e-17
89.7
307
25.1
Sro3945_g352070
Seminavis robusta
9.5e-17
89.7
338
21.6
Pp3c24_2470
Physcomitrella patens
2.4e-15
85.1
285
23.9
AT5G49215
Arabidopsis thaliana
1.5e-14
82.4
274
25.5
AT1G19170
Arabidopsis thaliana
2.0e-14
82.0
296
24.3
AT3G16850
Arabidopsis thaliana
3.4e-14
81.3
296
23.6
Pp3c16_7320
Physcomitrella patens
5.8e-14
80.5
229
26.6
AT3G61490
Arabidopsis thaliana
2.4e-12
75.1
290
22.8
AT4G23500
Arabidopsis thaliana
3.2e-12
74.7
295
22.0
Pp3c19_14240
Physcomitrella patens
2.1e-11
72.0
119
34.5
Pp3c16_9310
Physcomitrella patens
3.9e-10
67.8
370
23.8
AT3G57790
Arabidopsis thaliana
1.1e-09
66.2
335
24.5
Pp3c5_16250
Physcomitrella patens
1.5e-09
65.9
287
23.3
AA0009G01040
Aureococcus anophagefferens
4.7e-08
60.8
379
21.1
gene795
Fragilariopsis cylindrus
4.7e-08
60.8
134
30.6
gene7516
Fragilariopsis cylindrus
2.4e-07
58.5
134
29.1
emh631800
Emiliania huxleyi
7.6e-06
53.5
158
29.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (66 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (2 genes)
Synedra acus (0 genes)
Physcomitrella patens (11 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing