Gene: AT1G48100 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G48100
Transcript Identifier
AT1G48100.1
Gene Type
Coding gene
Location
1 : 17766921-17769625 : positive

Family Information

Homologous gene family
HOM02SEM000762
(58 genes in 4 species)
specific family

Descriptions

Description
Pectin lyase-like superfamily protein
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Identifiers

Type Value
uniprotQ949Z1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
ISS
Gene Ontologycarbohydrate metabolic process1
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0010047
IEA
PLAZA Integrative Orthologyfruit dehiscence AT2G41850
GO:0005976
IEA
PLAZA Integrative Orthologypolysaccharide metabolic process YJR153W
GO:0022411
IEA
PLAZA Integrative Orthologycellular component disassembly AT2G41850
GO:0000003
IEA
PLAZA Integrative Orthologyreproduction AT2G41850
GO:0009900
IEA
PLAZA Integrative Orthologydehiscence AT2G41850
GO:0009901
IEA
PLAZA Integrative Orthologyanther dehiscence AT2G41850
GO:0048827
IEA
PLAZA Integrative Orthologyphyllome development AT2G41850
GO:1901575
IEA
PLAZA Integrative Orthologyorganic substance catabolic process YJR153W
GO:0022414
IEA
PLAZA Integrative Orthologyreproductive process AT2G41850
GO:0090567
IEA
PLAZA Integrative Orthologyreproductive shoot system development AT2G41850
GO:0048829
IEA
PLAZA Integrative Orthologyroot cap development AT1G65570
GO:0032501
IEA
PLAZA Integrative Orthologymulticellular organismal process AT2G41850
GO:0099402
IEA
PLAZA Integrative Orthologyplant organ development AT2G41850
GO:0032502
IEA
PLAZA Integrative Orthologydevelopmental process AT2G41850
GO:0048466
IEA
PLAZA Integrative Orthologyandroecium development AT2G41850
GO:0043170
IEA
PLAZA Integrative Orthologymacromolecule metabolic process YJR153W
GO:0032504
IEA
PLAZA Integrative Orthologymulticellular organism reproduction AT2G41850
GO:0022622
IEA
PLAZA Integrative Orthologyroot system development AT1G65570
GO:0009056
IEA
PLAZA Integrative Orthologycatabolic process YJR153W
GO:0048856
IEA
PLAZA Integrative Orthologyanatomical structure development AT2G41850
GO:0007275
IEA
PLAZA Integrative Orthologymulticellular organism development AT2G41850
GO:0009057
IEA
PLAZA Integrative Orthologymacromolecule catabolic process YJR153W
GO:0010227
IEA
PLAZA Integrative Orthologyfloral organ abscission AT2G41850
GO:0048653
IEA
PLAZA Integrative Orthologyanther development AT2G41850
GO:0048731
IEA
PLAZA Integrative Orthologysystem development AT2G41850
GO:0000272
IEA
PLAZA Integrative Orthologypolysaccharide catabolic process YJR153W
GO:0044248
IEA
PLAZA Integrative Orthologycellular catabolic process YJR153W
GO:0009838
IEA
PLAZA Integrative Orthologyabscission AT2G41850
GO:0048608
IEA
PLAZA Integrative Orthologyreproductive structure development AT2G41850
GO:0048609
IEA
PLAZA Integrative Orthologymulticellular organismal reproductive process AT2G41850
GO:0017144
IEA
PLAZA Integrative Orthologydrug metabolic process YJR153W
GO:0010393
IEA
PLAZA Integrative Orthologygalacturonan metabolic process YJR153W
GO:0048443
IEA
PLAZA Integrative Orthologystamen development AT2G41850
GO:0016052
IEA
PLAZA Integrative Orthologycarbohydrate catabolic process YJR153W
GO:0048367
IEA
PLAZA Integrative Orthologyshoot system development AT2G41850
GO:0009908
IEA
PLAZA Integrative Orthologyflower development AT2G41850
GO:0045490
IEA
PLAZA Integrative Orthologypectin catabolic process YJR153W
GO:0003006
IEA
PLAZA Integrative Orthologydevelopmental process involved in reproduction AT2G41850
GO:0061458
IEA
PLAZA Integrative Orthologyreproductive system development AT2G41850
GO:0048364
IEA
PLAZA Integrative Orthologyroot development AT1G65570
GO:0044237
IEA
PLAZA Integrative Orthologycellular metabolic process YJR153W
GO:0048437
IEA
PLAZA Integrative Orthologyfloral organ development AT2G41850
GO:0045488
IEA
PLAZA Integrative Orthologypectin metabolic process YJR153W
GO:0044277
IEA
PLAZA Integrative Orthologycell wall disassembly AT2G41850
GO:0009830
IEA
PLAZA Integrative Orthologycell wall modification involved in abscission AT2G41850
GO:0009791
IEA
PLAZA Integrative Orthologypost-embryonic development AT2G41850
GO:0048438
IEA
PLAZA Integrative Orthologyfloral whorl development AT2G41850
GO:0042737
IEA
PLAZA Integrative Orthologydrug catabolic process YJR153W
GO:0009831
IMP
Gene Ontologyplant-type cell wall modification involved in multidimensional cell growth2 3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004650
IDA
ISS
Gene Ontologypolygalacturonase activity1 2 3
GO:0004650
IEA
InterPropolygalacturonase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
ISM
Gene Ontologyextracellular region4
GO:0055044
IEA
PLAZA Integrative Orthologysymplast AT1G65570
GO:0030054
IEA
PLAZA Integrative Orthologycell junction AT1G65570
GO:0005911
IEA
PLAZA Integrative Orthologycell-cell junction AT1G65570
GO:0048046
IEA
PLAZA Integrative Orthologyapoplast AT1G65570
GO:0009506
IEA
PLAZA Integrative Orthologyplasmodesma AT1G65570
GO:0005618
IDA
Gene Ontologycell wall2 3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR012334Pectin lyase fold
IPR000743Glycoside hydrolase, family 28
IPR006626Parallel beta-helix repeat
IPR011050Pectin lyase fold/virulence factor

No MapMan annotations defined for this gene.
No Kegg annotations defined for this gene.
No chloroplast target sequence found.