Gene: AT2G41850 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT2G41850
Transcript Identifier
AT2G41850.1
Gene Type
Coding gene
Location
2 : 17461918-17464059 : negative

Family Information

Homologous gene family
HOM02SEM000762
(58 genes in 4 species)
specific family
Duplication type
Block duplicate

Descriptions

Curated Summary
ADPG2.
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Identifiers

Type Value
uniprotQ8RY29
aliasADPG2
aliaspolygalacturonase abscission zone A. thaliana
aliasPGAZAT
aliasARABIDOPSIS DEHISCENCE ZONE POLYGALACTURONASE 2

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
ISS
Gene Ontologycarbohydrate metabolic process1
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0010227
IMP
Gene Ontologyfloral organ abscission2 3
GO:0010047
IMP
Gene Ontologyfruit dehiscence2 3
GO:0009901
IMP
Gene Ontologyanther dehiscence2 3
GO:0009830
TAS
Gene Ontologycell wall modification involved in abscission2 3
GO:0005976
IEA
PLAZA Integrative Orthologypolysaccharide metabolic process AT3G07970
GO:0030154
IEA
PLAZA Integrative Orthologycell differentiation AT3G07970
GO:0048235
IEA
PLAZA Integrative Orthologypollen sperm cell differentiation AT3G07970
GO:0048232
IEA
PLAZA Integrative Orthologymale gamete generation AT3G07970
GO:0048598
IEA
PLAZA Integrative Orthologyembryonic morphogenesis AT2G33160
GO:0009790
IEA
PLAZA Integrative Orthologyembryo development AT2G33160
GO:0042737
IEA
PLAZA Integrative Orthologydrug catabolic process AT3G07970
GO:0009793
IEA
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT2G33160
GO:0060560
IEA
PLAZA Integrative Orthologydevelopmental growth involved in morphogenesis AT2G33160
GO:0048316
IEA
PLAZA Integrative Orthologyseed development AT2G33160
GO:0009555
IEA
PLAZA Integrative Orthologypollen development AT3G07970
GO:0045488
IEA
PLAZA Integrative Orthologypectin metabolic process AT3G07970
GO:0009834
IEA
PLAZA Integrative Orthologyplant-type secondary cell wall biogenesis AT1G78400
GO:0044237
IEA
PLAZA Integrative Orthologycellular metabolic process AT3G07970
GO:0009832
IEA
PLAZA Integrative Orthologyplant-type cell wall biogenesis AT1G78400
GO:0048364
IEA
PLAZA Integrative Orthologyroot development AT1G65570
GO:0009826
IEA
PLAZA Integrative Orthologyunidimensional cell growth AT2G33160
GO:0044085
IEA
PLAZA Integrative Orthologycellular component biogenesis AT1G78400
GO:0045490
IEA
PLAZA Integrative Orthologypectin catabolic process AT3G07970
GO:0016052
IEA
PLAZA Integrative Orthologycarbohydrate catabolic process AT3G07970
GO:0055046
IEA
PLAZA Integrative Orthologymicrogametogenesis AT3G07970
GO:0017144
IEA
PLAZA Integrative Orthologydrug metabolic process AT3G07970
GO:0010393
IEA
PLAZA Integrative Orthologygalacturonan metabolic process AT3G07970
GO:0010154
IEA
PLAZA Integrative Orthologyfruit development AT2G33160
GO:0000902
IEA
PLAZA Integrative Orthologycell morphogenesis AT2G33160
GO:0044248
IEA
PLAZA Integrative Orthologycellular catabolic process AT3G07970
GO:0040007
IEA
PLAZA Integrative Orthologygrowth AT2G33160
GO:0042546
IEA
PLAZA Integrative Orthologycell wall biogenesis AT1G78400
GO:0000272
IEA
PLAZA Integrative Orthologypolysaccharide catabolic process AT3G07970
GO:0019953
IEA
PLAZA Integrative Orthologysexual reproduction AT3G07970
GO:0016049
IEA
PLAZA Integrative Orthologycell growth AT2G33160
GO:0009057
IEA
PLAZA Integrative Orthologymacromolecule catabolic process AT3G07970
GO:0009056
IEA
PLAZA Integrative Orthologycatabolic process AT3G07970
GO:0022622
IEA
PLAZA Integrative Orthologyroot system development AT1G65570
GO:0009653
IEA
PLAZA Integrative Orthologyanatomical structure morphogenesis AT2G33160
GO:0007276
IEA
PLAZA Integrative Orthologygamete generation AT3G07970
GO:0080159
IEA
PLAZA Integrative Orthologyzygote elongation AT2G33160
GO:0043170
IEA
PLAZA Integrative Orthologymacromolecule metabolic process AT3G07970
GO:0032989
IEA
PLAZA Integrative Orthologycellular component morphogenesis AT2G33160
GO:0051704
IEA
PLAZA Integrative Orthologymulti-organism process AT3G07970
GO:0044703
IEA
PLAZA Integrative Orthologymulti-organism reproductive process AT3G07970
GO:0048829
IEA
PLAZA Integrative Orthologyroot cap development AT1G65570
GO:0010098
IEA
PLAZA Integrative Orthologysuspensor development AT2G33160
GO:0048229
IEA
PLAZA Integrative Orthologygametophyte development AT3G07970
GO:1901575
IEA
PLAZA Integrative Orthologyorganic substance catabolic process AT3G07970
GO:0048589
IEA
PLAZA Integrative Orthologydevelopmental growth AT2G33160
GO:0048869
IEA
PLAZA Integrative Orthologycellular developmental process AT2G33160
GO:0022412
IEA
PLAZA Integrative Orthologycellular process involved in reproduction in multicellular organism AT3G07970

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004650
IDA
ISS
Gene Ontologypolygalacturonase activity1 2 3
GO:0004650
IEA
InterPropolygalacturonase activity
GO:0005488
IEA
PLAZA Integrative Orthologybinding AT1G80170
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding AT1G80170

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
ISM
Gene Ontologyextracellular region4
GO:0030312
IEA
PLAZA Integrative Orthologyexternal encapsulating structure AT2G33160
GO:0071944
IEA
PLAZA Integrative Orthologycell periphery AT2G33160
GO:0005618
IEA
PLAZA Integrative Orthologycell wall AT2G33160
GO:0016020
IEA
PLAZA Integrative Orthologymembrane AT3G15720
GO:0046658
IEA
PLAZA Integrative Orthologyanchored component of plasma membrane AT3G15720
GO:0005623
IEA
PLAZA Integrative Orthologycell AT2G33160
GO:0009506
IEA
PLAZA Integrative Orthologyplasmodesma AT1G65570
GO:0048046
IEA
PLAZA Integrative Orthologyapoplast AT1G65570
GO:0005886
IEA
PLAZA Integrative Orthologyplasma membrane AT3G15720
GO:0005911
IEA
PLAZA Integrative Orthologycell-cell junction AT1G65570
GO:0030054
IEA
PLAZA Integrative Orthologycell junction AT1G65570
GO:0031226
IEA
PLAZA Integrative Orthologyintrinsic component of plasma membrane AT3G15720
GO:0031224
IEA
PLAZA Integrative Orthologyintrinsic component of membrane AT3G15720
GO:0031225
IEA
PLAZA Integrative Orthologyanchored component of membrane AT3G15720
GO:0044459
IEA
PLAZA Integrative Orthologyplasma membrane part AT3G15720
GO:0055044
IEA
PLAZA Integrative Orthologysymplast AT1G65570
GO:0044464
IEA
PLAZA Integrative Orthologycell part AT2G33160
GO:0009505
IEA
PLAZA Integrative Orthologyplant-type cell wall AT3G07830
GO:0044425
IEA
PLAZA Integrative Orthologymembrane part AT3G15720

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR012334Pectin lyase fold
IPR000743Glycoside hydrolase, family 28
IPR006626Parallel beta-helix repeat
IPR011050Pectin lyase fold/virulence factor

No MapMan annotations defined for this gene.
KeggID Description
K01213E3.2.1.67; galacturan 1,4-alpha-galacturonidase
K01184E3.2.1.15; polygalacturonase
No chloroplast target sequence found.