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Interactive Phylogenetics Module
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0002G05090
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0002G05090
Aureococcus anophagefferens
3.7e-106
385.6
193
100.0
WBGene00021344
Caenorhabditis elegans
2.2e-42
173.7
186
55.9
Ec-12_001530
Ectocarpus siliculosus
6.0e-40
165.6
192
49.0
Pp3c2_33440
Physcomitrella patens
2.8e-37
156.8
195
50.3
AT1G67500
Arabidopsis thaliana
4.5e-35
149.4
190
47.9
Cre09.g387400
Chlamydomonas reinhardtii
4.5e-35
149.4
195
49.2
ENSG00000009413
Homo sapiens
4.2e-33
142.9
188
47.9
YPL167C
Saccharomyces cerevisiae strain S288C
1.0e-31
138.3
196
44.4
Sro443_g144000
Seminavis robusta
3.9e-31
136.3
204
42.6
ccr21960
Chondrus crispus
8.7e-31
135.2
194
43.8
FBgn0002891
Drosophila melanogaster
2.5e-30
133.7
195
45.6
emh350960
Emiliania huxleyi
4.3e-30
132.9
190
48.9
emh185860
Emiliania huxleyi
4.3e-30
132.9
190
48.9
CM18G01020
Cyanidioschyzon merolae
1.3e-29
131.3
206
42.7
fso173980
Fistulifera solaris
2.8e-29
130.2
187
44.9
tps28070
Thalassiosira pseudonana
1.1e-28
128.3
186
43.5
SPAC688.10
Schizosaccharomyces pombe
1.8e-28
127.5
194
39.2
fso141100
Fistulifera solaris
3.1e-28
126.7
195
43.1
gsu92350
Galdieria sulphuraria
2.0e-27
124.0
197
39.6
CC00G194270
Cyclotella cryptica
2.6e-27
123.6
191
41.9
sya00G217340
Synedra acus
2.6e-27
123.6
187
43.9
ptri13370
Phaeodactylum tricornutum
4.5e-27
122.9
203
41.9
gene530
Fragilariopsis cylindrus
2.9e-26
120.2
210
38.6
ps00G16990
Pseudo-nitzschia multiseries
1.3e-23
111.3
209
36.8
WBGene00008645
Caenorhabditis elegans
9.6e-22
105.1
201
35.8
Pp3c6_19160
Physcomitrella patens
2.8e-21
103.6
198
34.3
Cre01.g015250
Chlamydomonas reinhardtii
4.8e-21
102.8
198
35.9
Naga_100229g7
Nannochloropsis gaditana
1.1e-20
101.7
198
36.4
tho175940
Thalassiosira oceanica
3.1e-20
100.1
144
47.2
Pp3c27_3350
Physcomitrella patens
4.0e-20
99.8
198
32.8
pte232000
Paramecium tetraurelia
9.0e-20
98.6
175
40.6
AA0005G01720
Aureococcus anophagefferens
2.0e-19
97.4
198
34.8
AT5G63960
Arabidopsis thaliana
2.6e-19
97.1
198
33.3
ENSG00000062822
Homo sapiens
4.5e-19
96.3
200
34.5
sya00G178640
Synedra acus
1.3e-18
94.7
198
32.8
Naga_100025g11
Nannochloropsis gaditana
2.9e-18
93.6
194
33.5
Ec-10_001440
Ectocarpus siliculosus
4.9e-18
92.8
198
34.3
gsu82940
Galdieria sulphuraria
6.5e-18
92.4
191
31.4
gene6212
Fragilariopsis cylindrus
8.4e-18
92.0
198
33.8
gene17542
Fragilariopsis cylindrus
8.4e-18
92.0
198
33.8
PSNMU-V1.4_AUG-EV-PASAV3_0048050
Pseudo-nitzschia multistriata
8.4e-18
92.0
198
34.3
ps00G51020
Pseudo-nitzschia multiseries
8.4e-18
92.0
198
33.8
FBgn0263600
Drosophila melanogaster
1.1e-17
91.7
198
32.8
fso144230
Fistulifera solaris
1.4e-17
91.3
200
33.5
CM14G01990
Cyanidioschyzon merolae
2.5e-17
90.5
192
33.3
SPBC336.04
Schizosaccharomyces pombe
2.5e-17
90.5
198
31.8
fso59390
Fistulifera solaris
9.3e-17
88.6
171
33.9
ccr136780
Chondrus crispus
1.2e-16
88.2
197
34.5
ptri98820
Phaeodactylum tricornutum
1.2e-16
88.2
198
32.8
CC00G177910
Cyclotella cryptica
2.1e-16
87.4
198
31.8
tps169130
Thalassiosira pseudonana
2.7e-16
87.0
198
32.8
pte563840
Paramecium tetraurelia
1.3e-15
84.7
195
34.4
Sro278_g106640
Seminavis robusta
1.8e-15
84.3
201
32.3
emh323040
Emiliania huxleyi
2.3e-15
84.0
219
30.1
emh151600
Emiliania huxleyi
2.3e-15
84.0
219
30.1
Pp3c17_18800
Physcomitrella patens
5.1e-15
82.8
165
33.9
YDL102W
Saccharomyces cerevisiae strain S288C
2.5e-14
80.5
198
31.8
Pp3c16_6050
Physcomitrella patens
3.7e-13
76.6
164
32.9
Pp3c25_2990
Physcomitrella patens
6.3e-13
75.9
193
30.6
Ec-06_005880
Ectocarpus siliculosus
5.3e-12
72.8
159
31.4
AA0001G00210
Aureococcus anophagefferens
7.6e-11
68.9
162
34.0
ccr140240
Chondrus crispus
1.0e-10
68.6
198
29.8
SPAC3H5.06c
Schizosaccharomyces pombe
1.7e-10
67.8
166
33.1
Pp3c13_14690
Physcomitrella patens
5.0e-10
66.2
193
30.1
Pp3c1_290
Physcomitrella patens
8.5e-10
65.5
182
29.1
Pp3c10_11570
Physcomitrella patens
5.5e-09
62.8
193
28.0
fso88210
Fistulifera solaris
1.2e-08
61.6
154
35.1
tho135840
Thalassiosira oceanica
2.1e-08
60.8
144
34.0
Sro49_g028720
Seminavis robusta
2.7e-08
60.5
184
30.4
Pp3c10_25280
Physcomitrella patens
4.6e-08
59.7
164
31.1
Pp3c2_390
Physcomitrella patens
6.1e-08
59.3
183
28.4
Pp3c11_13900
Physcomitrella patens
1.0e-07
58.5
192
28.6
AA0021G01210
Aureococcus anophagefferens
1.4e-07
58.2
180
30.0
Pp3c15_13700
Physcomitrella patens
2.3e-07
57.4
101
32.7
Pp3c13_14630
Physcomitrella patens
5.1e-07
56.2
193
28.5
WBGene00012936
Caenorhabditis elegans
6.7e-07
55.8
173
28.3
tho331580
Thalassiosira oceanica
6.7e-07
55.8
158
32.9
ps00G116560
Pseudo-nitzschia multiseries
8.8e-07
55.5
182
29.1
Pp3c15_13750
Physcomitrella patens
1.1e-06
55.1
101
32.7
tps230140
Thalassiosira pseudonana
1.1e-06
55.1
183
33.3
pte511280
Paramecium tetraurelia
1.9e-06
54.3
210
24.8
Pp3c2_29370
Physcomitrella patens
4.3e-06
53.1
181
28.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (5 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (4 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (3 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (3 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (3 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (3 genes)
Synedra acus (2 genes)
Physcomitrella patens (16 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing